PDB entry 6rex
View 6rex on RCSB PDB site
Description: Crystal structure of the light-driven sodium pump KR2 in the pentameric form, pH 6.0
Class: membrane protein
Keywords: light-driven sodium pump, ion translocation, retinal, rhodopsin, MEMBRANE PROTEIN
Deposited on
2019-04-12, released
2019-04-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Sodium pumping rhodopsin
Species: Dokdonia eikasta [TaxId:308116]
Gene: NaR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6rexa_ - Chain 'B':
Compound: Sodium pumping rhodopsin
Species: Dokdonia eikasta [TaxId:308116]
Gene: NaR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6rexb_ - Chain 'C':
Compound: Sodium pumping rhodopsin
Species: Dokdonia eikasta [TaxId:308116]
Gene: NaR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6rexc_ - Chain 'D':
Compound: Sodium pumping rhodopsin
Species: Dokdonia eikasta [TaxId:308116]
Gene: NaR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6rexd_ - Chain 'E':
Compound: Sodium pumping rhodopsin
Species: Dokdonia eikasta [TaxId:308116]
Gene: NaR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6rexe_ - Heterogens: OLC, LFA, NA, BOG, RET, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6rexA (A:)
qelgnanfenfigategfseiayqftshiltlgyavmlagllyfiltiknvdkkfqmsni
lsavvmvsaflllyaqaqnwtssftfneevgryfldpsgdlfnngyrylnwlidvpmllf
qilfvvslttskfssvrnqfwfsgammiitgyigqfyevsnltaflvwgaissafffhil
wvmkkvinegkegispagqkilsniwilfliswtlypgaylmpyltgvdgflysedgvma
rqlvytiadvsskviygvllgnlaitlsknkel
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6rexB (B:)
qelgnanfenfigategfseiayqftshiltlgyavmlagllyfiltiknvdkkfqmsni
lsavvmvsaflllyaqaqnwtssftfneevgryfldpsgdlfnngyrylnwlidvpmllf
qilfvvslttskfssvrnqfwfsgammiitgyigqfyevsnltaflvwgaissafffhil
wvmkkvinegkegispagqkilsniwilfliswtlypgaylmpyltgvdgflysedgvma
rqlvytiadvsskviygvllgnlaitlsknkel
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>6rexC (C:)
qelgnanfenfigategfseiayqftshiltlgyavmlagllyfiltiknvdkkfqmsni
lsavvmvsaflllyaqaqnwtssftfneevgryfldpsgdlfnngyrylnwlidvpmllf
qilfvvslttskfssvrnqfwfsgammiitgyigqfyevsnltaflvwgaissafffhil
wvmkkvinegkegispagqkilsniwilfliswtlypgaylmpyltgvdgflysedgvma
rqlvytiadvsskviygvllgnlaitlsknkel
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>6rexD (D:)
qelgnanfenfigategfseiayqftshiltlgyavmlagllyfiltiknvdkkfqmsni
lsavvmvsaflllyaqaqnwtssftfneevgryfldpsgdlfnngyrylnwlidvpmllf
qilfvvslttskfssvrnqfwfsgammiitgyigqfyevsnltaflvwgaissafffhil
wvmkkvinegkegispagqkilsniwilfliswtlypgaylmpyltgvdgflysedgvma
rqlvytiadvsskviygvllgnlaitlsknkel
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>6rexE (E:)
qelgnanfenfigategfseiayqftshiltlgyavmlagllyfiltiknvdkkfqmsni
lsavvmvsaflllyaqaqnwtssftfneevgryfldpsgdlfnngyrylnwlidvpmllf
qilfvvslttskfssvrnqfwfsgammiitgyigqfyevsnltaflvwgaissafffhil
wvmkkvinegkegispagqkilsniwilfliswtlypgaylmpyltgvdgflysedgvma
rqlvytiadvsskviygvllgnlaitlsknkel