PDB entry 6ra2

View 6ra2 on RCSB PDB site
Description: structural basis for recognition and ring-cleavage of the pseudomonas quinolone signal (pqs) by aqdc
Deposited on 2019-04-05, released 2019-07-03
The last revision was dated 2020-06-24, with a file datestamp of 2020-06-19.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative dioxygenase (1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase)
    Species: Mycobacteroides abscessus [TaxId:36809]
    Gene: MAB_0303
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Putative dioxygenase (1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase)
    Species: Mycobacteroides abscessus [TaxId:36809]
    Gene: MAB_0303
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Putative dioxygenase (1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase)
    Species: Mycobacteroides abscessus [TaxId:36809]
    Gene: MAB_0303
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ra2A (A:)
mittktvngvqiafddqghepgpvfvtlsgwahdlraydgmlpylraaqrtvrvcwrghg
pdrnlvgdfgidemaadtiglldalevdsfvpiahahggwaaleiadrlgaqrvpavmil
dlimtpaprefvaalhgiqdperwkegrdglvqswlagttnqavldhvrydsgghgfdmw
aragrvideayrtwgspmrrmealaepcairhvfshpkigeydalhddfaarhpwfsyrr
lggethfpgielpqqvaaeaidllagari

    Sequence, based on observed residues (ATOM records):
    >6ra2A (A:)
ittktvngvqiafddqghepgpvfvtlsgwahdlraydgmlpylraaqrtvrvcwrghgp
drnlvgdfgidemaadtiglldalevdsfvpiahahggwaaleiadrlgaqrvpavmild
limtpaprefvaalhgiqdperwkegrdglvqswlagttnqavldhvrydsgghgfdmwa
ragrvideayrtwgspmrrmealaepcairhvfshpkeydalhddfaarhpwfsyrrlgg
ethfpgielpqqvaaeaidllaga

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ra2E (E:)
mittktvngvqiafddqghepgpvfvtlsgwahdlraydgmlpylraaqrtvrvcwrghg
pdrnlvgdfgidemaadtiglldalevdsfvpiahahggwaaleiadrlgaqrvpavmil
dlimtpaprefvaalhgiqdperwkegrdglvqswlagttnqavldhvrydsgghgfdmw
aragrvideayrtwgspmrrmealaepcairhvfshpkigeydalhddfaarhpwfsyrr
lggethfpgielpqqvaaeaidllagari

    Sequence, based on observed residues (ATOM records):
    >6ra2E (E:)
ittktvngvqiafddqghepgpvfvtlsgwahdlraydgmlpylraaqrtvrvcwrghgp
drnlvgdfgidemaadtiglldalevdsfvpiahahggwaaleiadrlgaqrvpavmild
limtpaprefvaalhgiqdperwkegrdglvqswlagttnqavldhvrydsgghgfdmwa
ragrvideayrtwgspmrrmealaepcairhvfshpkigeydalhddfaarhpwfsyrrl
ggethfpgielpqqvaaeaidllaga

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ra2F (F:)
mittktvngvqiafddqghepgpvfvtlsgwahdlraydgmlpylraaqrtvrvcwrghg
pdrnlvgdfgidemaadtiglldalevdsfvpiahahggwaaleiadrlgaqrvpavmil
dlimtpaprefvaalhgiqdperwkegrdglvqswlagttnqavldhvrydsgghgfdmw
aragrvideayrtwgspmrrmealaepcairhvfshpkigeydalhddfaarhpwfsyrr
lggethfpgielpqqvaaeaidllagari

    Sequence, based on observed residues (ATOM records):
    >6ra2F (F:)
ttktvngvqiafddqghepgpvfvtlsgwahdlraydgmlpylraaqrtvrvcwrghgpd
rnlvgdfgidemaadtiglldalevdsfvpiahahggwaaleiadrlgaqrvpavmildl
imtpaprefvaalhgiqdperwkegrdglvqswlagttnqavldhvrydsgghgfdmwar
agrvideayrtwgspmrrmealaepcairhvfshpeydalhddfaarhpwfsyrrlgget
hfpgielpqqvaaeaidllag