PDB entry 6r9p

View 6r9p on RCSB PDB site
Description: structure of saccharomyces cerevisiae apo pan2 pseudoubiquitin hydrolase-rna exonuclease (uch-exo) module in complex with aauuaa rna
Deposited on 2019-04-03, released 2019-05-22
The last revision was dated 2019-08-21, with a file datestamp of 2019-08-16.
Experiment type: XRAY
Resolution: 2.98 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PAN2-PAN3 deadenylation complex catalytic subunit PAN2
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: PAN2, YGL094C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53010 (17-End)
      • engineered mutation (468)
  • Chain 'B':
    Compound: aauuaa RNA
    Species: SACCHAROMYCES CEREVISIAE, synthetic [TaxId:4932]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6r9pA (A:)
    mhhhhhhhhlevlfqgptsdiqtytsinkyevppaysrlpltsgrfgtdnfdftpfnnte
    ysgldpdvdnhytnaiiqlyrfipemfnfvvgclkdenfettlltdlgylfdmmershgk
    icsssnfqaslksltdkrqlengepqehleeyleslciresiedfnssesikrnmpqkfn
    rfllsqlikeeaqtvnhnitlnqcfgleteirtecscdhydttvkllpslsisginktvi
    kqlnkksngqnilpyieyamknvtqknsicptcgktetitqectvknlpsvlslelslld
    tefsnirssknwltsefygsiiknkavlrstaselkgtshifkyelngyvakitdnnnet
    rlvtyvkkynpkencfkwlmfndylvveiteeealkmtypwktpeiiiycdaeelrkpff
    svdtysinydilfrdyfangirdtarreykllthdeapksgtlvaidaafvslqselcei
    dhqgirsiirpkrtalarisiirgeegelygvpfvddyvvntnhiedyltrysgilpgdl
    dpekstkrlvrrnvvyrkvwllmqlgcvfvghglnndfkhininvprnqirdtaiyflqg
    krylslrylayvllgmniqegnhdsiedahtalilykkylhlkekaifekvlnsvyeegr
    ahnfkvpetskg
    

    Sequence, based on observed residues (ATOM records):
    >6r9pA (A:)
    tsdiqtytsinkyevppaysrlpltsdnfdftpfnnteysgldpdvdnhytnaiiqlyrf
    ipemfnfvvgclkdenfettlltdlgylfdmmershgkicsssnfqaslksltdkrpqeh
    leeyleslciesikrnmpqkfnrfllsqlikeeaqtvnhnitlnqcfgleteirtecscd
    hydttvkllpslsisginktvikqlgqnilpyieyamknvtqknstetitqectvknlps
    vlslelslldtefsnirssknwltsefygsiiknkavlrstaselkgtshifkyelngyv
    akitdnnnetrlvtyvkkynpkencfkwlmfndylvveiteeealkmtypwktpeiiiyc
    daeelrkpffsvdtysinydilfrdyfangireykllthdeapksgtlvaidaafvslqs
    elceidhirpkrtalarisiirgeegelygvpfvddyvvntnhiedyltrysgilpgdld
    pekstkrlvrrnvvyrkvwllmqlgcvfvghglnndfkhininvprnqirdtaiyflqgk
    rylslrylayvllgmniqegnhdsiedahtalilykkylhlkekaifekvlnsvyeegra
    hnfkvpe
    

  • Chain 'B':
    No sequence available.