PDB entry 6r8k

View 6r8k on RCSB PDB site
Description: complex of rice blast (magnaporthe oryzae) effector protein avr-pikd with an engineered hma domain of pikp-1 from rice (oryza sativa)
Deposited on 2019-04-02, released 2019-04-24
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: NBS-LRR class disease resistance protein Pikh-1
    Species: Oryza sativa subsp. japonica [TaxId:39947]
    Gene: Pi-km1, Pikh-1
    Database cross-references and differences (RAF-indexed):
    • Uniprot D5L9G5 (Start-79)
      • conflict (78)
  • Chain 'C':
    Compound: avr-pik protein
    Species: MAGNAPORTHE ORYZAE [TaxId:318829]
    Gene: AVR-Pik, AvrPik, Pikm, Pikp
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6r8kB (B:)
gpglkqkivikvamegnncrskamalvastggvdsvalvgdlrdkievvgygidpiklis
alrkkvgdaellqvsqaked

    Sequence, based on observed residues (ATOM records):
    >6r8kB (B:)
lkqkivikvamegnncrskamalvastggvdsvalvgdlrdkievvgygidpiklisalr
kkvgdaellqvsqaked

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6r8kC (C:)
metgnkyiekraidlsrerdpnffdhpgipvpecfwfmfknnvrqdagtcysswkmdmkv
gpnwvhiksddncnlsgdfppgwivlgkkrpgf

    Sequence, based on observed residues (ATOM records):
    >6r8kC (C:)
raidlsrerdpnffdhpgipvpecfwfmfknnvrqdagtcysswkmdmkvgpnwvhiksd
dncnlsgdfppgwivlgkkrpgf