PDB entry 6r8a

View 6r8a on RCSB PDB site
Description: Structure of Arabidopsis thaliana GLR3.3 ligand-binding domain in complex with L-methionine
Class: membrane protein
Keywords: glutamate receptor-like, amino acid-binding, membrane protein
Deposited on 2019-04-01, released 2020-01-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor 3.3,Glutamate receptor 3.3
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GLR3.3, At1g42540, T8D8.1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9C8E7 (Start-110)
      • linker (111-113)
    • Uniprot Q9C8E7 (114-End)
    Domains in SCOPe 2.08: d6r8aa_
  • Chain 'B':
    Compound: Glutamate receptor 3.3,Glutamate receptor 3.3
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GLR3.3, At1g42540, T8D8.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6r8ab_
  • Chain 'C':
    Compound: Glutamate receptor 3.3,Glutamate receptor 3.3
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GLR3.3, At1g42540, T8D8.1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9C8E7 (Start-110)
      • linker (111-113)
    • Uniprot Q9C8E7 (114-End)
    Domains in SCOPe 2.08: d6r8ac_
  • Chain 'D':
    Compound: Glutamate receptor 3.3,Glutamate receptor 3.3
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GLR3.3, At1g42540, T8D8.1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9C8E7 (Start-110)
      • linker (111-113)
    • Uniprot Q9C8E7 (114-End)
    Domains in SCOPe 2.08: d6r8ad_
  • Heterogens: MET, NA, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6r8aA (A:)
gpmgkelkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygng
kenpsythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgie
slrerddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivde
rpyvelflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkw
lmknact

    Sequence, based on observed residues (ATOM records): (download) 
    >6r8aA (A:)
elkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygngkenps
ythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgieslrer
ddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivderpyve
lflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkwlc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6r8aB (B:)
gpmgkelkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygng
kenpsythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgie
slrerddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivde
rpyvelflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkw
lmknact

    Sequence, based on observed residues (ATOM records): (download) 
    >6r8aB (B:)
elkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygngkenps
ythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglviesgyqvgsfaesylrne
lnisrlvplgtpeayakalkdgpsvaaivderpyvelflssncayeftksgwgfafprds
plaidlstailelaengdlqrihdkwlmc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6r8aC (C:)
gpmgkelkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygng
kenpsythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgie
slrerddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivde
rpyvelflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkw
lmknact

    Sequence, based on observed residues (ATOM records): (download) 
    >6r8aC (C:)
elkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygngkenps
ythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgieslrer
ddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivderpyve
lflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkwlc

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6r8aD (D:)
gpmgkelkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygng
kenpsythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgie
slrerddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivde
rpyvelflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkw
lmknact

    Sequence, based on observed residues (ATOM records): (download) 
    >6r8aD (D:)
elkigvplrvsykefvsqirgtenmfkgfcidvftaavnllpyavpvkfipygngkenps
ythmvemittgnfdgvvgdvaivtnrtkivdftqpyaasglvvvapggtpikgieslrer
ddpigyqvgsfaesylrnelnisesrlvplgtpeayakalkdgpskggvaaivderpyve
lflssncayrivgqeftksgwgfafprdsplaidlstailelaengdlqrihdkwlm