PDB entry 6r76

View 6r76 on RCSB PDB site
Description: Crystal structure of trans-3-Hydroxy-L-proline dehydratase from Thermococcus litoralis - open conformation
Class: lyase
Keywords: Hydro-lyase, hydroxyproline dehydratase, LYASE
Deposited on 2019-03-28, released 2019-07-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: proline racemase
    Species: Thermococcus litoralis DSM 5473 [TaxId:523849]
    Gene: OCC_00387
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6r76a_
  • Chain 'B':
    Compound: proline racemase
    Species: Thermococcus litoralis DSM 5473 [TaxId:523849]
    Gene: OCC_00387
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6r76b_
  • Chain 'C':
    Compound: proline racemase
    Species: Thermococcus litoralis DSM 5473 [TaxId:523849]
    Gene: OCC_00387
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6r76c_
  • Chain 'D':
    Compound: proline racemase
    Species: Thermococcus litoralis DSM 5473 [TaxId:523849]
    Gene: OCC_00387
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6r76d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6r76A (A:)
mgshhhhhhssgenlyfqghmfkklenlekweppkdwmviktldthtageplriilsgfp
eipgktilekrrylmenldhlrkalmweprghadmygaiitepvseeadfgvifmhnegy
stmcghatialgkvavecglveakepiteikmdspaglikiyvkvrdgkvekvyfhnvps
fvlfkdetinvpgigevkydlayggafyafvnaeeiglkctpeyyrqlidvgmkikraim
sekeirhpfeedlsflygtifigepedenshsrhvcifadgevdrsptgtgvsarlaily
ekgeidigeeitiesiigtkftgkvveetryglyraiipevggnayivakntflidpqdp
lkygfflr

    Sequence, based on observed residues (ATOM records): (download) 
    >6r76A (A:)
mfkklenlekweppkdwmviktldthtageplriilsgfpeipgktilekrrylmenldh
lrkalmweprghadmygaiitepvseeadfgvifmhnegystmcghatialgkvavecgl
veakepiteikmdspaglikiyvkvrdgkvekvyfhnvpsfvlfkdetinvpgigevkyd
layggafyafvnaeeiglkctpeyyrqlidvgmkikraimsekeirhpfeedlsflygti
figepedenshsrhvcifadgevdrsptgtgvsarlailyekgeidigeeitiesiigtk
ftgkvveetryglyraiipevggnayivakntflidpqdplkygfflr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6r76B (B:)
mgshhhhhhssgenlyfqghmfkklenlekweppkdwmviktldthtageplriilsgfp
eipgktilekrrylmenldhlrkalmweprghadmygaiitepvseeadfgvifmhnegy
stmcghatialgkvavecglveakepiteikmdspaglikiyvkvrdgkvekvyfhnvps
fvlfkdetinvpgigevkydlayggafyafvnaeeiglkctpeyyrqlidvgmkikraim
sekeirhpfeedlsflygtifigepedenshsrhvcifadgevdrsptgtgvsarlaily
ekgeidigeeitiesiigtkftgkvveetryglyraiipevggnayivakntflidpqdp
lkygfflr

    Sequence, based on observed residues (ATOM records): (download) 
    >6r76B (B:)
klenlekweppkdwmviktldthtageplriilsgfpeipgktilekrrylmenldhlrk
almweprghadmygaiitepvseeadfgvifmhnegystmcghatialgkvavecglvea
kepiteikmdspaglikiyvkvrdgkvekvyfhnvpsfvlfkdetigevkydlayggafy
afvnaeeiglkctpeyyrqlidvgmkikraimsekeirhpfesflygtifigepedensh
srhvcifadgevdrsptgtgvsarlailyekgeidigeeitiesiigtkftgkvveetry
glyraiipevggnayivakntflidpqdplkygffl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6r76C (C:)
mgshhhhhhssgenlyfqghmfkklenlekweppkdwmviktldthtageplriilsgfp
eipgktilekrrylmenldhlrkalmweprghadmygaiitepvseeadfgvifmhnegy
stmcghatialgkvavecglveakepiteikmdspaglikiyvkvrdgkvekvyfhnvps
fvlfkdetinvpgigevkydlayggafyafvnaeeiglkctpeyyrqlidvgmkikraim
sekeirhpfeedlsflygtifigepedenshsrhvcifadgevdrsptgtgvsarlaily
ekgeidigeeitiesiigtkftgkvveetryglyraiipevggnayivakntflidpqdp
lkygfflr

    Sequence, based on observed residues (ATOM records): (download) 
    >6r76C (C:)
fkklenlekweppkdwmviktldthtageplriilsgfpeipgktilekrrylmenldhl
rkalmweprghadmygaiitepvsadfgvifmhnegystmcghatialgkvavecglvea
kepiteikmdspaglikiyvkvrdgkvekvyfhnvpsfvlfkdetinvpgigevkydlay
ggafyafvnaeeiglkctpeyyrqlidvgmkikraimsekeirhpfeedlsflygtifig
epedenshsrhvcifadgevdrsptgtgvsarlailyekgeidigeeitiesiigtkftg
kvveetryglyraiipevggnayivakntflidpqdplkygfflr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6r76D (D:)
mgshhhhhhssgenlyfqghmfkklenlekweppkdwmviktldthtageplriilsgfp
eipgktilekrrylmenldhlrkalmweprghadmygaiitepvseeadfgvifmhnegy
stmcghatialgkvavecglveakepiteikmdspaglikiyvkvrdgkvekvyfhnvps
fvlfkdetinvpgigevkydlayggafyafvnaeeiglkctpeyyrqlidvgmkikraim
sekeirhpfeedlsflygtifigepedenshsrhvcifadgevdrsptgtgvsarlaily
ekgeidigeeitiesiigtkftgkvveetryglyraiipevggnayivakntflidpqdp
lkygfflr

    Sequence, based on observed residues (ATOM records): (download) 
    >6r76D (D:)
fkklenlekweppkdwmviktldthtageplriilsgfpeipgktilekrrylmenldhl
rkalmweprghadmygaiitepvseeadfgvifmhnegystmcghatialgkvavecglv
eakepiteikmdspaglikiyvkvrdgkvekvyfhnvpsfvlfkdetinvgevkydlayg
gafyafvnaeeiglkctpeyyrqlidvgmkikraimsekeirhpfsflygtifigepede
nshsrhvcifadgevdrsptgtgvsarlailyekgeidigeeitiesiigtkftgkvvee
tryglyraiipevggnayivakntflidpqdplkygfflr