PDB entry 6r5d

View 6r5d on RCSB PDB site
Description: crystal structure of the pri1 subunit of human primase bound to datp
Deposited on 2019-03-24, released 2019-09-11
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA primase small subunit
    Species: Homo sapiens [TaxId:9606]
    Gene: PRIM1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA primase small subunit
    Species: Homo sapiens [TaxId:9606]
    Gene: PRIM1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: DTP, ZN, MN, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6r5dA (A:)
gtsmetfdptelpellklyyrrlfpysqyyrwlnyggviknyfqhrefsftlkddiyiry
qsfnnqsdlekemqkmnpykidigavyshrpnqhntvklgafqaqekelvfdidmtdydd
vrrccssadicpkcwtlmtmairiidralkedfgfkhrlwvysgrrgvhcwvcdesvrkl
ssavrsgiveylslvkggqdvkkkvhlsekihpfirksiniikkyfeeyalvnqdilenk
eswdkilalvpetihdelqqsfqkshnslqrwehlkkvasryqnnikndkygpwleweim
lqycfprldinvskginhllkspfsvhpktgrisvpidlqkvdqfdpftvptisficrel
daistneeekeeneaesdvkhrtrdykktslapyvkvfehflenldksrk

    Sequence, based on observed residues (ATOM records):
    >6r5dA (A:)
dptelpellklyyrrlfpysqyyrwlnyggviknyfqhrefsftlkddiyiryqsfnnqs
dlekemqkmnpykidigavyshrpnqhntvklgafqaqekelvfdidmtdyddvrrccss
adicpkcwtlmtmairiidralkedfgfkhrlwvysgrrgvhcwvcdesvrklssavrsg
iveylslvkggqdvkkkvhlsekihpfirksiniikkyfeeyalvnqdilenkeswdkil
alvpetihdelqqsfqkshnslqrwehlkkvasryqnnikndkygpwleweimlqycfpr
ldinvskginhllkspfsvhpktgrisvpidlqkvdqfdpftvptisficreldaitrdy
kktslapyvkvfehflenldksrk

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6r5dE (E:)
gtsmetfdptelpellklyyrrlfpysqyyrwlnyggviknyfqhrefsftlkddiyiry
qsfnnqsdlekemqkmnpykidigavyshrpnqhntvklgafqaqekelvfdidmtdydd
vrrccssadicpkcwtlmtmairiidralkedfgfkhrlwvysgrrgvhcwvcdesvrkl
ssavrsgiveylslvkggqdvkkkvhlsekihpfirksiniikkyfeeyalvnqdilenk
eswdkilalvpetihdelqqsfqkshnslqrwehlkkvasryqnnikndkygpwleweim
lqycfprldinvskginhllkspfsvhpktgrisvpidlqkvdqfdpftvptisficrel
daistneeekeeneaesdvkhrtrdykktslapyvkvfehflenldksrk

    Sequence, based on observed residues (ATOM records):
    >6r5dE (E:)
etfdptelpellklyyrrlfpysqyyrwlnyggviknyfqhrefsftlkddiyiryqsfn
nqsdlekemqkmnpykidigavyshrpnqhntvklgafqaqekelvfdidmtdyddvrrc
cssadicpkcwtlmtmairiidralkedfgfkhrlwvysgrrgvhcwvcdesvrklssav
rsgiveylslvkggqdvkkkvhlsekihpfirksiniikkyfeeyalvnqdilenkeswd
kilalvpetihdelqqsfqkshnslqrwehlkkvasryqnnikndkygpwleweimlqyc
fprldinvskginhllkspfsvhpktgrisvpidlqkvdqfdpftvptisficreldaid
ykktslapyvkvfehflenldksrk