PDB entry 6qyy

View 6qyy on RCSB PDB site
Description: the crystal structure of head fiber gp8.5 n base in bacteriophage phi29
Deposited on 2019-03-10, released 2019-06-12
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid fiber protein
    Species: BACILLUS PHAGE PHI29 [TaxId:10756]
    Gene: 8.5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3VMP4 (0-115)
      • expression tag (116-118)
  • Chain 'B':
    Compound: Capsid fiber protein
    Species: BACILLUS PHAGE PHI29 [TaxId:10756]
    Gene: 8.5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3VMP4 (0-115)
      • expression tag (116-117)
  • Chain 'C':
    Compound: Capsid fiber protein
    Species: BACILLUS PHAGE PHI29 [TaxId:10756]
    Gene: 8.5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3VMP4 (0-115)
      • expression tag (116-117)
  • Chain 'D':
    Compound: Capsid fiber protein
    Species: BACILLUS PHAGE PHI29 [TaxId:10756]
    Gene: 8.5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3VMP4 (0-115)
      • expression tag (116-117)
  • Chain 'E':
    Compound: Capsid fiber protein
    Species: BACILLUS PHAGE PHI29 [TaxId:10756]
    Gene: 8.5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3VMP4 (0-115)
      • expression tag (116-117)
  • Chain 'F':
    Compound: Capsid fiber protein
    Species: BACILLUS PHAGE PHI29 [TaxId:10756]
    Gene: 8.5
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3VMP4 (0-115)
      • expression tag (116-117)
  • Heterogens: SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6qyyA (A:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskleh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6qyyB (B:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskleh

    Sequence, based on observed residues (ATOM records):
    >6qyyB (B:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskle

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6qyyC (C:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskleh

    Sequence, based on observed residues (ATOM records):
    >6qyyC (C:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskle

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6qyyD (D:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskleh

    Sequence, based on observed residues (ATOM records):
    >6qyyD (D:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskle

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6qyyE (E:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskleh

    Sequence, based on observed residues (ATOM records):
    >6qyyE (E:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskle

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6qyyF (F:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskleh

    Sequence, based on observed residues (ATOM records):
    >6qyyF (F:)
mmvsftaraksnvmayrllaysqgddiieishaaentipdyvavkdvdkgdltqvnmypl
aawqviagsdikvgdnlttgkdgtavptddpstvfgyaveeaqegqlvtlvisrskle