PDB entry 6qwf

View 6qwf on RCSB PDB site
Description: the transcriptional regulator prfa-a94v mutant from listeria monocytogenes in complex with a 30-bp operator prfa-box motif
Deposited on 2019-03-05, released 2020-04-01
The last revision was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Listeriolysin positive regulatory factor A
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: prfA, CDR86_15285, D3B95_15085, DOE67_09655
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4TVQ0 (Start-238)
      • engineered mutation (95)
  • Chain 'B':
    Compound: Listeriolysin positive regulatory factor A
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: prfA, CDR86_15285, D3B95_15085, DOE67_09655
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4TVQ0 (Start-238)
      • engineered mutation (95)
  • Chain 'C':
    Compound: DNA (30-mer)
    Species: Listeria monocytogenes, synthetic [TaxId:1639]
  • Chain 'D':
    Compound: DNA (30-mer)
    Species: Listeria monocytogenes, synthetic [TaxId:1639]
  • Heterogens: GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6qwfA (A:)
gamnaqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtim
nlqyykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfq
tlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyss
giahssavsriisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln

    Sequence, based on observed residues (ATOM records):
    >6qwfA (A:)
naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlq
yykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfqtlq
kqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgia
hssavsriisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6qwfB (B:)
gamnaqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtim
nlqyykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfq
tlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyss
giahssavsriisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln

    Sequence, based on observed residues (ATOM records):
    >6qwfB (B:)
naqaeefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlq
yykgafvimsgfidtetsvgyynleviseqatvyvikinelkellsknlthffyvfqtlq
kqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssgia
hssavsriisklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.