PDB entry 6qtt

View 6qtt on RCSB PDB site
Description: crystal structure of an arabidopsis wd40 domain in complex with a transcription factor homolog
Deposited on 2019-02-25, released 2019-07-10
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.51 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase COP1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: COP1, At2g32950, T21L14.11
    Database cross-references and differences (RAF-indexed):
    • Uniprot P43254 (3-329)
      • expression tag (1-2)
  • Chain 'B':
    Compound: Transcription factor HY5-like
    Species: Arabidopsis thaliana, synthetic [TaxId:3702]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8W191 (Start-8)
      • conflict (8)
  • Heterogens: MLI, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6qttA (A:)
gamtftrysrlrviaeirhgdifhsanivssiefdrddelfatagvsrcikvfdfssvvn
epadmqcpivemstrsklsclswnkheknhiassdyegivtvwdvttrqslmeyeehekr
awsvdfsrtepsmlvsgsddckvkvwctrqeasvinidmkaniccvkynpgssnyiavgs
adhhihyydlrnisqplhvfsghkkavsyvkflsnnelasastdstlrlwdvkdnlpvrt
frghtneknfvgltvnseylacgsetnevyvyhkeitrpvtshrfgspdmddaeeeagsy
fisavcwksdsptmltansqgtikvlvlaa

    Sequence, based on observed residues (ATOM records):
    >6qttA (A:)
amtftrysrlrviaeirnivssiefdrddelfatagvsrcikvfdfssvvnepqcpivem
strsklsclswnkheknhiassdyegivtvwdvttrqslmeyeehekrawsvdfsrteps
mlvsgsddckvkvwctrqeasvinidmkaniccvkynpgssnyiavgsadhhihyydlrn
isqplhvfsghkkavsyvkflsnnelasastdstlrlwdvkdnlpvrtfrghtneknfvg
ltvnseylacgsetnevyvyhkeitrpvtshrfgssyfisavcwksdsptmltansqgti
kvlvlaa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6qttB (B:)
ellmvpdmy

    Sequence, based on observed residues (ATOM records):
    >6qttB (B:)
llmvpdmy