PDB entry 6qtr

View 6qtr on RCSB PDB site
Description: crystal structure of a mutant arabidopsis wd40 domain in complex with a transcription factor
Deposited on 2019-02-25, released 2019-07-10
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.37 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase COP1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: COP1, At2g32950, T21L14.11
    Database cross-references and differences (RAF-indexed):
    • Uniprot P43254 (3-329)
      • expression tag (1-2)
  • Chain 'B':
    Compound: Transcription factor HY5
    Species: ARABIDOPSIS THALIANA, synthetic [TaxId:3702]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O24646 (0-10)
      • conflict (10)
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6qtrA (A:)
gamtftrysrlrviaeirhgdifhsanivssiefdrddelfatagvsrcikvfdfssvvn
epadmqcpivemstrsklsclswnkheknhiassdyegivtvwdvttrqslmeyeehekr
awsvdfsrtepsmlvsgsddckvkvwctrqeasvinidmkaniccvkynpgssnyiavgs
adhhihyydlrnisqplhvfsghkkavsyvkflsnnelasastdstlrlwdvkdnlpvrt
frghtneknfvgltvnseylacgsetnevyvyhkeitrpvtshrfgspdmddaeeeagsy
fisavcwksdsptmltansqgtikvlvlaa

    Sequence, based on observed residues (ATOM records):
    >6qtrA (A:)
amtftrysrlrviaeirnivssiefdrddelfatagvsrcikvfdfssvvneqcpivems
trsklsclswnkheknhiassdyegivtvwdvttrqslmeyeehekrawsvdfsrtepsm
lvsgsddckvkvwctrqeasvinidmkaniccvkynpgssnyiavgsadhhihyydlrni
sqplhvfsghkkavsyvkflsnnelasastdstlrlwdvkdnlpvrtfrghtneknfvgl
tvnseylacgsetnevyvyhkeitrpvtshrfgagsyfisavcwksdsptmltansqgti
kvlvlaa

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6qtrB (B:)
eirrvpefggy