PDB entry 6qss

View 6qss on RCSB PDB site
Description: Crystal Structure of Ignicoccus islandicus malate dehydrogenase co-crystallized with 10 mM Tb-Xo4
Class: oxidoreductase
Keywords: Ignicoccus islandicus, malate dehydrogenase, Tb-Xo4, OXIDOREDUCTASE
Deposited on 2019-02-21, released 2019-07-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-25, with a file datestamp of 2019-09-20.
Experiment type: XRAYSAXS
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Ignicoccus islandicus DSM 13165 [TaxId:940295]
    Gene: EYM_03995
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qssa1, d6qssa2
  • Chain 'B':
    Compound: malate dehydrogenase
    Species: Ignicoccus islandicus DSM 13165 [TaxId:940295]
    Gene: EYM_03995
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qssb1, d6qssb2
  • Chain 'C':
    Compound: malate dehydrogenase
    Species: Ignicoccus islandicus DSM 13165 [TaxId:940295]
    Gene: EYM_03995
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qssc1, d6qssc2
  • Chain 'D':
    Compound: malate dehydrogenase
    Species: Ignicoccus islandicus DSM 13165 [TaxId:940295]
    Gene: EYM_03995
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qssd1, d6qssd2
  • Heterogens: 7MT, TB, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6qssA (A:)
maripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrs
itveafedvskvenadaivitagkprkadmsrrdlanvnaqiirdigdklrdrnpgalyv
vvtnpvdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehge
eafvawstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqe
ivvshlaneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraaka
irnvyesilt

    Sequence, based on observed residues (ATOM records): (download) 
    >6qssA (A:)
aripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrsi
tveafedvskvenadaivitagkpmsrrdlanvnaqiirdigdklrdrnpgalyvvvtnp
vdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehgeeafva
wstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqeivvsh
laneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraakairnvy
esi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qssB (B:)
maripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrs
itveafedvskvenadaivitagkprkadmsrrdlanvnaqiirdigdklrdrnpgalyv
vvtnpvdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehge
eafvawstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqe
ivvshlaneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraaka
irnvyesilt

    Sequence, based on observed residues (ATOM records): (download) 
    >6qssB (B:)
ripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrsit
veafedvskvenadaivitagkprkadmsrrdlanvnaqiirdigdklrdrnpgalyvvv
tnpvdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehgeea
fvawstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqeiv
vshlaneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraakair
nvyesil

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6qssC (C:)
maripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrs
itveafedvskvenadaivitagkprkadmsrrdlanvnaqiirdigdklrdrnpgalyv
vvtnpvdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehge
eafvawstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqe
ivvshlaneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraaka
irnvyesilt

    Sequence, based on observed residues (ATOM records): (download) 
    >6qssC (C:)
aripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrsi
tveafedvskvenadaivitagkprmsrrdlanvnaqiirdigdklrdrnpgalyvvvtn
pvdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehgeeafv
awstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqeivvs
hlaneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraakairnv
yesil

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6qssD (D:)
maripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrs
itveafedvskvenadaivitagkprkadmsrrdlanvnaqiirdigdklrdrnpgalyv
vvtnpvdvmtmvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehge
eafvawstvtikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqe
ivvshlaneskiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraaka
irnvyesilt

    Sequence, based on observed residues (ATOM records): (download) 
    >6qssD (D:)
ripykvavigtgrvgatfaytmavvpgiarmtlvdvvpglakgvmedikhaaavfrrsit
veafedvskvenadaivitmsrrdlanvnaqiirdigdklrdrnpgalyvvvtnpvdvmt
mvlddvigskgtvigtgtsldtfrfraavsellnvpivavdgyvvgehgeeafvawstvt
ikgihidqyikerninisreqiekyvkdvaasiiasqgatiwgpaatfqeivvshlanes
kiipislpqniegvgrvavsvptiisgrlkplvqllneeeqerlkraakairnvyesil