PDB entry 6qq5

View 6qq5 on RCSB PDB site
Description: cryo-em structure of dimeric quinol dependent nitric oxide reductase (qnor) from alcaligenes xylosoxidans
Deposited on 2019-02-17, released 2019-09-11
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 3.9 Å
R-factor: N/A
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nitric oxide reductase subunit B
    Species: Alcaligenes xylosoxydans xylosoxydans [TaxId:85698]
    Gene: norB_1, ERS451415_02175
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Nitric oxide reductase subunit B
    Species: Alcaligenes xylosoxydans xylosoxydans [TaxId:85698]
    Gene: norB_1, ERS451415_02175
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HEM, FE, CA

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6qq5A (A:)
mgpyrrlwftliavlavtfallgfyggevyrqappipeevasadgtrlfgrddildgqta
wqsiggmqlgsiwghgayqapdwtadwlhrelmawldlaardahgrdygqldapaqaalr
eqlkaeyranradaaggkltlsprraqavaqteayydqlfsdapalhrsrenyamkentl
pdanrrrqmthfffwtawaagteregtsvtytnnwpheplignhpssenvmwsiisvvvl
lagiglliwawaflrgkeedeppapardplttfaltpsqralgkylflvvalfgfqvllg
gftahytvegqkfygidlsqwfpyslvrtwhiqsalfwiatgflaaglflaplinggrdp
kyqkagvdilfwalvlvvvgsfagnylaiaqimppdlnfwlghqgyeyvdlgrlwqigkf
agicfwlvlmlrgivpalrtpggdknllalltasvgaiglfygagffygerthltvmeyw
rwwivhlwvegffevfattalafifstlglvsrrmattaslasaslfmlggipgtfhhly
fagtttpvmavgasfsalevvplivlgheawenwrlktrapwmenlkwplmcfvavafwn
mlgagvfgfminppvslyyiqglnttpvhahaalfgvygflalgftllvlryirpqyals
pglmklafwglnlglalmiftsllpigliqfhasvsegmwyarseafmqqdilktlrwgr
tfgdvvfllgalamvvqvilgllsgk

    Sequence, based on observed residues (ATOM records):
    >6qq5A (A:)
mgpyrrlwftliavlavtfallgfyggevyrqappipeevasadgtrlfgrddildgqta
wqsiggmqlgsiwghgayqapdwtadwlhrelmawldlaardahgrdygqldapaqaalr
eqlkaeyranradaaggkltlsprraqavaqteayydqlfsdapalhrsrenyamkentl
pdanrrrqmthfffwtawaagteregtsvtytnnwpheplignhpssenvmwsiisvvvl
lagiglliwawaflrgppapardplttfaltpsqralgkylflvvalfgfqvllggftah
ytvegqkfygidlsqwfpyslvrtwhiqsalfwiatgflaaglflaplinggrdpkyqka
gvdilfwalvlvvvgsfagnylaiaqimppdlnfwlghqgyeyvdlgrlwqigkfagicf
wlvlmlrgivpalrtpggdknllalltasvgaiglfygagffygerthltvmeywrwwiv
hlwvegffevfattalafifstlglvsrrmattaslasaslfmlggipgtfhhlyfagtt
tpvmavgasfsalevvplivlgheawenwrlktrapwmenlkwplmcfvavafwnmlgag
vfgfminppvslyyiqglnttpvhahaalfgvygflalgftllvlryirpqyalspglmk
lafwglnlglalmiftsllpigliqfhasvsegmwyarseafmqqdilktlrwgrtfgdv
vfllgalamvvqvilgll

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6qq5B (B:)
mgpyrrlwftliavlavtfallgfyggevyrqappipeevasadgtrlfgrddildgqta
wqsiggmqlgsiwghgayqapdwtadwlhrelmawldlaardahgrdygqldapaqaalr
eqlkaeyranradaaggkltlsprraqavaqteayydqlfsdapalhrsrenyamkentl
pdanrrrqmthfffwtawaagteregtsvtytnnwpheplignhpssenvmwsiisvvvl
lagiglliwawaflrgkeedeppapardplttfaltpsqralgkylflvvalfgfqvllg
gftahytvegqkfygidlsqwfpyslvrtwhiqsalfwiatgflaaglflaplinggrdp
kyqkagvdilfwalvlvvvgsfagnylaiaqimppdlnfwlghqgyeyvdlgrlwqigkf
agicfwlvlmlrgivpalrtpggdknllalltasvgaiglfygagffygerthltvmeyw
rwwivhlwvegffevfattalafifstlglvsrrmattaslasaslfmlggipgtfhhly
fagtttpvmavgasfsalevvplivlgheawenwrlktrapwmenlkwplmcfvavafwn
mlgagvfgfminppvslyyiqglnttpvhahaalfgvygflalgftllvlryirpqyals
pglmklafwglnlglalmiftsllpigliqfhasvsegmwyarseafmqqdilktlrwgr
tfgdvvfllgalamvvqvilgllsgk

    Sequence, based on observed residues (ATOM records):
    >6qq5B (B:)
mgpyrrlwftliavlavtfallgfyggevyrqappipeevasadgtrlfgrddildgqta
wqsiggmqlgsiwghgayqapdwtadwlhrelmawldlaardahgrdygqldapaqaalr
eqlkaeyranradaaggkltlsprraqavaqteayydqlfsdapalhrsrenyamkentl
pdanrrrqmthfffwtawaagteregtsvtytnnwpheplignhpssenvmwsiisvvvl
lagiglliwawaflrgppapardplttfaltpsqralgkylflvvalfgfqvllggftah
ytvegqkfygidlsqwfpyslvrtwhiqsalfwiatgflaaglflaplinggrdpkyqka
gvdilfwalvlvvvgsfagnylaiaqimppdlnfwlghqgyeyvdlgrlwqigkfagicf
wlvlmlrgivpalrtpggdknllalltasvgaiglfygagffygerthltvmeywrwwiv
hlwvegffevfattalafifstlglvsrrmattaslasaslfmlggipgtfhhlyfagtt
tpvmavgasfsalevvplivlgheawenwrlktrapwmenlkwplmcfvavafwnmlgag
vfgfminppvslyyiqglnttpvhahaalfgvygflalgftllvlryirpqyalspglmk
lafwglnlglalmiftsllpigliqfhasvsegmwyarseafmqqdilktlrwgrtfgdv
vfllgalamvvqvilgll