PDB entry 6qpt

View 6qpt on RCSB PDB site
Description: Crystal structure of nitrite bound synthetic core domain of nitrite reductase from Ralstonia pickettii (residues 1-331)
Class: metal binding protein
Keywords: synthetic core domain, nitrite reductase, inter-copper electron transfer, METAL BINDING PROTEIN
Deposited on 2019-02-15, released 2019-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-26, with a file datestamp of 2020-02-21.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Copper-containing nitrite reductase
    Species: Ralstonia pickettii [TaxId:329]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpta1, d6qpta2
  • Chain 'B':
    Compound: Copper-containing nitrite reductase
    Species: Ralstonia pickettii [TaxId:329]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qptb1, d6qptb2
  • Chain 'C':
    Compound: Copper-containing nitrite reductase
    Species: Ralstonia pickettii [TaxId:329]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qptc1, d6qptc2
  • Chain 'D':
    Compound: Copper-containing nitrite reductase
    Species: Ralstonia pickettii [TaxId:329]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qptd1, d6qptd2
  • Chain 'E':
    Compound: Copper-containing nitrite reductase
    Species: Ralstonia pickettii [TaxId:329]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpte1, d6qpte2
  • Chain 'F':
    Compound: Copper-containing nitrite reductase
    Species: Ralstonia pickettii [TaxId:329]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qptf1, d6qptf2
  • Heterogens: CU, PG4, NO2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6qptA (A:)
asaklpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytf
wtfggtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesq
ftfkalnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagky
rekglqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfh
vigaifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgam
ailkidgaenklvysgkeldsvylgdraapn

    Sequence, based on observed residues (ATOM records): (download) 
    >6qptA (A:)
pgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytfwtfgg
tvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesqftfka
lnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagkyrekgl
qpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfhvigai
fdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgamailki
dgaenklvysgkeldsvylg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qptB (B:)
asaklpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytf
wtfggtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesq
ftfkalnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagky
rekglqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfh
vigaifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgam
ailkidgaenklvysgkeldsvylgdraapn

    Sequence, based on observed residues (ATOM records): (download) 
    >6qptB (B:)
pgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytfwtfgg
tvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesqftfka
lnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagkyrekgl
qpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfhvigai
fdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgamailki
dgaenklvysgkeldsvyl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6qptC (C:)
asaklpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytf
wtfggtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesq
ftfkalnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagky
rekglqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfh
vigaifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgam
ailkidgaenklvysgkeldsvylgdraapn

    Sequence, based on observed residues (ATOM records): (download) 
    >6qptC (C:)
lpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytfwtfg
gtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesqftfk
alnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagkyrekg
lqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfhviga
ifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgamailk
idgaenklvysgkeldsvyl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6qptD (D:)
asaklpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytf
wtfggtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesq
ftfkalnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagky
rekglqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfh
vigaifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgam
ailkidgaenklvysgkeldsvylgdraapn

    Sequence, based on observed residues (ATOM records): (download) 
    >6qptD (D:)
pgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytfwtfgg
tvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesqftfka
lnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagkyrekgl
qpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfhvigai
fdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgamailki
dgaenklvysgkeldsvyl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6qptE (E:)
asaklpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytf
wtfggtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesq
ftfkalnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagky
rekglqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfh
vigaifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgam
ailkidgaenklvysgkeldsvylgdraapn

    Sequence, based on observed residues (ATOM records): (download) 
    >6qptE (E:)
lpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytfwtfg
gtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesqftfk
alnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagkyrekg
lqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfhviga
ifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgamailk
idgaenklvysgkeldsvyl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6qptF (F:)
asaklpgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytf
wtfggtvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesq
ftfkalnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagky
rekglqpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfh
vigaifdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgam
ailkidgaenklvysgkeldsvylgdraapn

    Sequence, based on observed residues (ATOM records): (download) 
    >6qptF (F:)
pgdfgpprgepihavltspplvpppvnrtypakvivelevvekemqisegvsytfwtfgg
tvpgsfirvrqgdtvefhlknhpsskmphnidlhgvtgpgggaassftapghesqftfka
lnegiyvyhcatapvgmhiangmyglilveppeglpkvdheyyvmqgdfytagkyrekgl
qpfdmekaiderpsyvlfngaegaltgdkalhakvgetvrifvgnggpnlvssfhvigai
fdqvryeggtnvqknvqttlipaggaavvkftarvpgsyvlvdhsifrafnkgamailki
dgaenklvysgkeldsvylg