PDB entry 6qpo

View 6qpo on RCSB PDB site
Description: Adenovirus species D serotype 49 Fiber-Knob KO1 mutant
Class: viral protein
Keywords: Adenovirus, Fiber-knob, Fiber, Knob, Head, Adenoviridae, Protein IV, mutant, wild type, wildtype, pIV, HAdV-D49, species D, serotype 49, Ad49, VIRAL PROTEIN
Deposited on 2019-02-14, released 2020-08-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-08-26, with a file datestamp of 2020-08-21.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09TX9
      • conflict (32-33)
    Domains in SCOPe 2.08: d6qpoa_
  • Chain 'B':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09TX9
      • conflict (32-33)
    Domains in SCOPe 2.08: d6qpob_
  • Chain 'C':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09TX9
      • conflict (32-33)
    Domains in SCOPe 2.08: d6qpoc_
  • Chain 'D':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09TX9
      • conflict (32-33)
    Domains in SCOPe 2.08: d6qpod_
  • Chain 'E':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09TX9
      • conflict (32-33)
    Domains in SCOPe 2.08: d6qpoe_
  • Chain 'F':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09TX9
      • conflict (32-33)
    Domains in SCOPe 2.08: d6qpof_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6qpoA (A:)
mkrhhhhhhgsgdlvawnkendrrtlwttpdpeanckvseekdskltlvltkcgsqilas
vsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsvigs
pyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisfnke
tesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpoA (A:)
endrrtlwttpdpeanckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qpoB (B:)
mkrhhhhhhgsgdlvawnkendrrtlwttpdpeanckvseekdskltlvltkcgsqilas
vsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsvigs
pyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisfnke
tesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpoB (B:)
endrrtlwttpdpeanckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6qpoC (C:)
mkrhhhhhhgsgdlvawnkendrrtlwttpdpeanckvseekdskltlvltkcgsqilas
vsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsvigs
pyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisfnke
tesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpoC (C:)
endrrtlwttpdpeanckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6qpoD (D:)
mkrhhhhhhgsgdlvawnkendrrtlwttpdpeanckvseekdskltlvltkcgsqilas
vsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsvigs
pyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisfnke
tesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpoD (D:)
endrrtlwttpdpeanckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6qpoE (E:)
mkrhhhhhhgsgdlvawnkendrrtlwttpdpeanckvseekdskltlvltkcgsqilas
vsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsvigs
pyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisfnke
tesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpoE (E:)
endrrtlwttpdpeanckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6qpoF (F:)
mkrhhhhhhgsgdlvawnkendrrtlwttpdpeanckvseekdskltlvltkcgsqilas
vsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsvigs
pyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisfnke
tesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpoF (F:)
endrrtlwttpdpeanckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae