PDB entry 6qpn

View 6qpn on RCSB PDB site
Description: Adenovirus species D serotype 49 Fiber-Knob
Class: viral protein
Keywords: Adenovirus, Fiber-knob, Fiber, Knob, Head, Adenoviridae, Protein IV, wild type, wildtype, pIV, HAdV-D49, species D, serotype 49, Ad49, VIRAL PROTEIN
Deposited on 2019-02-14, released 2020-08-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-08-26, with a file datestamp of 2020-08-21.
Experiment type: XRAY
Resolution: 2.74 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpna_
  • Chain 'B':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpnb_
  • Chain 'C':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpnc_
  • Chain 'D':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpnd_
  • Chain 'E':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpne_
  • Chain 'F':
    Compound: Fiber
    Species: Human adenovirus 49 [TaxId:218120]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qpnf_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6qpnA (A:)
mrgshhhhhhgskkgdlvawnkendrrtlwttpdpspnckvseekdskltlvltkcgsqi
lasvsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsv
igspyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisf
nketesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpnA (A:)
endrrtlwttpdpspnckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qpnB (B:)
mrgshhhhhhgskkgdlvawnkendrrtlwttpdpspnckvseekdskltlvltkcgsqi
lasvsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsv
igspyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisf
nketesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpnB (B:)
endrrtlwttpdpspnckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6qpnC (C:)
mrgshhhhhhgskkgdlvawnkendrrtlwttpdpspnckvseekdskltlvltkcgsqi
lasvsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsv
igspyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisf
nketesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpnC (C:)
endrrtlwttpdpspnckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6qpnD (D:)
mrgshhhhhhgskkgdlvawnkendrrtlwttpdpspnckvseekdskltlvltkcgsqi
lasvsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsv
igspyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisf
nketesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpnD (D:)
endrrtlwttpdpspnckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6qpnE (E:)
mrgshhhhhhgskkgdlvawnkendrrtlwttpdpspnckvseekdskltlvltkcgsqi
lasvsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsv
igspyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisf
nketesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpnE (E:)
endrrtlwttpdpspnckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6qpnF (F:)
mrgshhhhhhgskkgdlvawnkendrrtlwttpdpspnckvseekdskltlvltkcgsqi
lasvsllvvkgkfaninnktnpgedykkfsvkllfdangklltgssldgnywnyknkdsv
igspyenavpfmpnstaypkiinngtanpedkksaakktivtnvylggdaakpvattisf
nketesncvysitfdfawnktyknvpfdsssltfsyiaqdaedkne

    Sequence, based on observed residues (ATOM records): (download) 
    >6qpnF (F:)
endrrtlwttpdpspnckvseekdskltlvltkcgsqilasvsllvvkgkfaninnktnp
gedykkfsvkllfdangklltgssldgnywnyknkdsvigspyenavpfmpnstaypkii
nngtanpedkksaakktivtnvylggdaakpvattisfnketesncvysitfdfawnkty
knvpfdsssltfsyiaqdae