PDB entry 6qp3

View 6qp3 on RCSB PDB site
Description: Crystal structure of the PLP-bound C-S lyase from Bacillus subtilis (strain 168)
Class: lyase
Keywords: pyridoxal phosphate binding, Cysteine-S-conjugate beta-lyase, LYASE
Deposited on 2019-02-13, released 2020-03-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-03-04, with a file datestamp of 2020-02-28.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cystathionine beta-lyase PatB
    Species: Bacillus subtilis (strain 168) [TaxId:224308]
    Gene: patB, BSU31440
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6qp3a_
  • Chain 'B':
    Compound: Cystathionine beta-lyase PatB
    Species: Bacillus subtilis (strain 168) [TaxId:224308]
    Gene: patB, BSU31440
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6qp3b_
  • Chain 'C':
    Compound: Cystathionine beta-lyase PatB
    Species: Bacillus subtilis (strain 168) [TaxId:224308]
    Gene: patB, BSU31440
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6qp3c_
  • Chain 'D':
    Compound: Cystathionine beta-lyase PatB
    Species: Bacillus subtilis (strain 168) [TaxId:224308]
    Gene: patB, BSU31440
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6qp3d_
  • Heterogens: ACT, PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6qp3A (A:)
mnfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgy
ttpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvyt
pfyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsre
dllklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniag
lqasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmn
eaeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgg
egfmrlnagcslatlqdglrrikaals

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qp3B (B:)
mnfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgy
ttpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvyt
pfyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsre
dllklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniag
lqasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmn
eaeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgg
egfmrlnagcslatlqdglrrikaals

    Sequence, based on observed residues (ATOM records): (download) 
    >6qp3B (B:)
nfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgyt
tpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvytp
fyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsred
llklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniagl
qasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmne
aeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgge
gfmrlnagcslatlqdglrrikaals

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6qp3C (C:)
mnfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgy
ttpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvyt
pfyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsre
dllklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniag
lqasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmn
eaeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgg
egfmrlnagcslatlqdglrrikaals

    Sequence, based on observed residues (ATOM records): (download) 
    >6qp3C (C:)
mnfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgy
ttpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvyt
pfyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsre
dllklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniag
lqasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmn
eaeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgg
egfmrlnagcslatlqdglrrikaal

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6qp3D (D:)
mnfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgy
ttpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvyt
pfyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsre
dllklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniag
lqasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmn
eaeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgg
egfmrlnagcslatlqdglrrikaals

    Sequence, based on observed residues (ATOM records): (download) 
    >6qp3D (D:)
nfdkreerlgtqsvkwdktgelfgvtdalpmwvadmdfrapeaitealkerldhgifgyt
tpdqktkdavcgwmqnrhgwkvnpesitfspgvvtalsmavqaftepgdqvvvqppvytp
fyhmvekngrhilhnpllekdgayaidfedletklsdpsvtlfilcnphnpsgrswsred
llklgelclehgvtvvsdeihsdlmlyghkhtpfaslsddfadisvtcaapsktfniagl
qasaiiipdrlkrakfsaslqrnglgglnafavtaieaayskggpwldelityieknmne
aeaflstelpkvkmmkpdasyliwldfsayglsdaelqqrmlkkgkvilepgtkygpgge
gfmrlnagcslatlqdglrrikaals