PDB entry 6qka

View 6qka on RCSB PDB site
Description: Di-tert-butyl Polysulfide inhibited sulfur oxygenase reductase
Class: oxidoreductase
Keywords: sulfur oxygenase reductase, 2-his-1-carboxylate facial triad, cysteine persulphuration, biogeochemical sulfur cycle, oxidoreductase
Deposited on 2019-01-28, released 2020-02-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sulfur oxygenase/reductase
    Species: Acidianus ambivalens [TaxId:2283]
    Gene: sor
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qkaa_
  • Chain 'B':
    Compound: Sulfur oxygenase/reductase
    Species: Acidianus ambivalens [TaxId:2283]
    Gene: sor
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qkab_
  • Chain 'C':
    Compound: Sulfur oxygenase/reductase
    Species: Acidianus ambivalens [TaxId:2283]
    Gene: sor
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qkac_
  • Chain 'D':
    Compound: Sulfur oxygenase/reductase
    Species: Acidianus ambivalens [TaxId:2283]
    Gene: sor
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qkad_
  • Chain 'E':
    Compound: Sulfur oxygenase/reductase
    Species: Acidianus ambivalens [TaxId:2283]
    Gene: sor
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qkae_
  • Chain 'F':
    Compound: Sulfur oxygenase/reductase
    Species: Acidianus ambivalens [TaxId:2283]
    Gene: sor
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6qkaf_
  • Heterogens: CSS, FE, TSY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6qkaA (A:)
mpkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygg
akmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeii
yanmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedai
vrtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpe
akntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegt
fwreylnenawrhpqfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6qkaA (A:)
pkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygga
kmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeiiy
anmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedaiv
rtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpea
kntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegtf
wreylne

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6qkaB (B:)
mpkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygg
akmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeii
yanmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedai
vrtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpe
akntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegt
fwreylnenawrhpqfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6qkaB (B:)
pkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygga
kmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeiiy
anmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedaiv
rtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpea
kntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegtf
wreylne

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6qkaC (C:)
mpkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygg
akmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeii
yanmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedai
vrtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpe
akntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegt
fwreylnenawrhpqfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6qkaC (C:)
pkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygga
kmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeiiy
anmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedaiv
rtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpea
kntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegtf
wreylne

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6qkaD (D:)
mpkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygg
akmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeii
yanmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedai
vrtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpe
akntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegt
fwreylnenawrhpqfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6qkaD (D:)
pkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygga
kmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeiiy
anmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedaiv
rtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpea
kntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegtf
wreylne

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6qkaE (E:)
mpkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygg
akmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeii
yanmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedai
vrtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpe
akntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegt
fwreylnenawrhpqfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6qkaE (E:)
pkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygga
kmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeiiy
anmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedaiv
rtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpea
kntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegtf
wreylne

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6qkaF (F:)
mpkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygg
akmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeii
yanmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedai
vrtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpe
akntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegt
fwreylnenawrhpqfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6qkaF (F:)
pkpyvainmaelknepktfemfasvgpkvxmvtarhpgfvgfqnhiqigilpfgnrygga
kmdmtkesstvrvlqytfwkdwkdheemhrqnwsylfrlcyscasqmiwgpwepiyeiiy
anmpintemtdftavvgkkfaegkpldipvisqpygkrvvafaehsvipgkekqfedaiv
rtlemlkkapgflgamvlkeigvsgigsmqfgakgfhqvlenpgslepdpnnvmysvpea
kntpqqyivhvewantdalmfgmgrvllypelrqvhdevldtlvygpyirilnpmmegtf
wreylne