PDB entry 6qi9

View 6qi9 on RCSB PDB site
Description: truncated human r2tp complex, structure 4 (adp-empty)
Deposited on 2019-01-18, released 2019-05-15
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 4.63 Å
R-factor: N/A
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ruvb-like 1
    Species: Homo sapiens [TaxId:9606]
    Gene: RUVBL1, INO80H, NMP238, TIP49, TIP49A
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ruvb-like 1
    Species: Homo sapiens [TaxId:9606]
    Gene: RUVBL1, INO80H, NMP238, TIP49, TIP49A
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: ruvb-like 1
    Species: Homo sapiens [TaxId:9606]
    Gene: RUVBL1, INO80H, NMP238, TIP49, TIP49A
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: RuvB-like 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RUVBL2, INO80J, TIP48, TIP49B, CGI-46
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: RuvB-like 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RUVBL2, INO80J, TIP48, TIP49B, CGI-46
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: RuvB-like 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RUVBL2, INO80J, TIP48, TIP49B, CGI-46
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ADP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6qi9A (A:)
    mkieevksttktqriashshvkglgldesglakqaasglvgqenareacgvivelikskk
    magravllagppgtgktalalaiaqelgskvpfcpmvgsevysteikktevlmenfrrai
    glriketkevyegevteltpcetenpmggygktishviiglktakgtkqlkldpsifesl
    qkerveagdviyieansgavkrqgrcdtyatefdleaeeyvplpkgdvhkkkeiiqdvtl
    hdldvanarpqggqdilsmmgqlmkpkkteitdklrgeinkvvnkyidqgiaelvpgvlf
    vdevhmldiecftylhralessiapivifasnrgncvirgteditsphgipldlldrvmi
    irtmlytpqemkqiikiraqteginiseealnhlgeigtkttlrysvqlltpanllakin
    gkdsiekehveeiselfydakssakiladqqdkymk
    

    Sequence, based on observed residues (ATOM records):
    >6qi9A (A:)
    kieevksttktqriashshvkglgldesglakqaasglvgqenareacgvivelikskkm
    agravllagppgtgktalalaiaqelgskvpfcpmvgsevysteikktevlmenfrraid
    vtlhdldvanartdklrgeinkvvnkyidqgiaelvpgvlfvdevhmldiecftylhral
    essiapivifasnrgncvirgteditsphgipldlldrvmiirtmlytpqemkqiikira
    qteginiseealnhlgeigtkttlrysvqlltpanllakingkdsiekehveeiselfyd
    akssakiladqqdkymk
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6qi9B (B:)
    mkieevksttktqriashshvkglgldesglakqaasglvgqenareacgvivelikskk
    magravllagppgtgktalalaiaqelgskvpfcpmvgsevysteikktevlmenfrrai
    glriketkevyegevteltpcetenpmggygktishviiglktakgtkqlkldpsifesl
    qkerveagdviyieansgavkrqgrcdtyatefdleaeeyvplpkgdvhkkkeiiqdvtl
    hdldvanarpqggqdilsmmgqlmkpkkteitdklrgeinkvvnkyidqgiaelvpgvlf
    vdevhmldiecftylhralessiapivifasnrgncvirgteditsphgipldlldrvmi
    irtmlytpqemkqiikiraqteginiseealnhlgeigtkttlrysvqlltpanllakin
    gkdsiekehveeiselfydakssakiladqqdkymk
    

    Sequence, based on observed residues (ATOM records):
    >6qi9B (B:)
    kieevksttktqriashshvkglgldesglakqaasglvgqenareacgvivelikskkm
    agravllagppgtgktalalaiaqelgskvpfcpmvgsevysteikktevlmenfrraig
    ltlhdldvanaklrgeinkvvnkyidqgiaelvpgvlfvdevhmldiecftylhraless
    iapivifasnrgncvirgteditsphgipldlldrvmiirtmlytpqemkqiikiraqte
    giniseealnhlgeigtkttlrysvqlltpanllakingkdsiekehveeiselfydaks
    sakiladqqd
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6qi9C (C:)
    mkieevksttktqriashshvkglgldesglakqaasglvgqenareacgvivelikskk
    magravllagppgtgktalalaiaqelgskvpfcpmvgsevysteikktevlmenfrrai
    glriketkevyegevteltpcetenpmggygktishviiglktakgtkqlkldpsifesl
    qkerveagdviyieansgavkrqgrcdtyatefdleaeeyvplpkgdvhkkkeiiqdvtl
    hdldvanarpqggqdilsmmgqlmkpkkteitdklrgeinkvvnkyidqgiaelvpgvlf
    vdevhmldiecftylhralessiapivifasnrgncvirgteditsphgipldlldrvmi
    irtmlytpqemkqiikiraqteginiseealnhlgeigtkttlrysvqlltpanllakin
    gkdsiekehveeiselfydakssakiladqqdkymk
    

    Sequence, based on observed residues (ATOM records):
    >6qi9C (C:)
    kieevksttktqriashshvkglgldesglakqaasglvgqenareacgvivelikskkm
    agravllagppgtgktalalaiaqelgskvpfcpmvgsevysteikktevlmenfrraig
    liiqdvtlhdldvanadklrgeinkvvnkyidqgiaelvpgvlfvdevhmldiecftylh
    ralessiapivifasnrgncvirgteditsphgipldlldrvmiirtmlytpqemkqiik
    iraqteginiseealnhlgeigtkttlrysvqlltpanllakingkdsiekehveeisel
    fydakssakiladqqd
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6qi9D (D:)
    matvtattkvpeirdvtrierigahshirglglddaleprqasqgmvgqlaarraagvvl
    emiregkiagravliagqpgtgktaiamgmaqalgpdtpftaiagseifslemsktealt
    qafrrsigvrikeeteiiegevveiqidrpatgtgskvgkltlkttemetiydlgtkmie
    sltkdkvqagdvitidkatgkisklgrsftrardydamgsqtkfvqcpdgelqkrkevvh
    tvslheidvinsrtqgflalfsgdtgeiksevreqinakvaewreegkaeiipgvlfide
    vhmldiesfsflnralesdmapvlimatnrgitrirgtsyqsphgipidlldrllivstt
    pysekdtkqilrirceeedvemsedaytvltrigletslryaiqlitaaslvcrkrkgte
    vqvddikrvyslfldesrstqymkeyqdaflfnelkgetmdts
    

    Sequence, based on observed residues (ATOM records):
    >6qi9D (D:)
    aarraagvvlemiregkiagravliagqpgtgktaiamgmaqalgpdtpftaiagseifs
    lemsktealtqafrrsislheidvsevreqinakvaewreegkaeiipgvlfidevhmld
    iesfsflnralesdmapvlimatnrgitrirgtsyqsphgipidlldrllivsttpysek
    dtkqilrirceeedvemsedaytvltrigletslryaiqlitaaslvcrkrkgtevqvdd
    ikrvyslfldesrstqymkeyqdaflfn
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6qi9E (E:)
    matvtattkvpeirdvtrierigahshirglglddaleprqasqgmvgqlaarraagvvl
    emiregkiagravliagqpgtgktaiamgmaqalgpdtpftaiagseifslemsktealt
    qafrrsigvrikeeteiiegevveiqidrpatgtgskvgkltlkttemetiydlgtkmie
    sltkdkvqagdvitidkatgkisklgrsftrardydamgsqtkfvqcpdgelqkrkevvh
    tvslheidvinsrtqgflalfsgdtgeiksevreqinakvaewreegkaeiipgvlfide
    vhmldiesfsflnralesdmapvlimatnrgitrirgtsyqsphgipidlldrllivstt
    pysekdtkqilrirceeedvemsedaytvltrigletslryaiqlitaaslvcrkrkgte
    vqvddikrvyslfldesrstqymkeyqdaflfnelkgetmdts
    

    Sequence, based on observed residues (ATOM records):
    >6qi9E (E:)
    tkvpeirdvtrierigahshirglglddaleprqasqgmvgqlaarraagvvlemiregk
    iagravliagqpgtgktaiamgmaqalgpdtpftaiagseifslemsktealtqafrrsi
    gvrislheidvinsrtqgflalfsgdtgeiksevreqinakvaewreegkaeiipgvlfi
    devhmldiesfsflnralesdmapvlimatnrgitrirgtsyqsphgipidlldrllivs
    ttpysekdtkqilrirceeedvemsedaytvltrigletslryaiqlitaaslvcrkrkg
    tevqvddikrvyslfldesrstqymkeyqdaflfn
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6qi9F (F:)
    matvtattkvpeirdvtrierigahshirglglddaleprqasqgmvgqlaarraagvvl
    emiregkiagravliagqpgtgktaiamgmaqalgpdtpftaiagseifslemsktealt
    qafrrsigvrikeeteiiegevveiqidrpatgtgskvgkltlkttemetiydlgtkmie
    sltkdkvqagdvitidkatgkisklgrsftrardydamgsqtkfvqcpdgelqkrkevvh
    tvslheidvinsrtqgflalfsgdtgeiksevreqinakvaewreegkaeiipgvlfide
    vhmldiesfsflnralesdmapvlimatnrgitrirgtsyqsphgipidlldrllivstt
    pysekdtkqilrirceeedvemsedaytvltrigletslryaiqlitaaslvcrkrkgte
    vqvddikrvyslfldesrstqymkeyqdaflfnelkgetmdts
    

    Sequence, based on observed residues (ATOM records):
    >6qi9F (F:)
    tkvpeirdvtrierigahshirglglddaleprqasqgmvgqlaarraagvvlemiregk
    iagravliagqpgtgktaiamgmaqalgpdtpftaiagseifslemsktealtqafrrsi
    tvslheidvinsrtqgflalfsgdtgeiksevreqinakvaewreegkaeiipgvlfide
    vhmldiesfsflnralesdmapvlimatnrgitrirgtsyqsphgipidlldrllivstt
    pysekdtkqilrirceeedvemsedaytvltrigletslryaiqlitaaslvcrkrkgte
    vqvddikrvyslfldesrstqymkeyqdaflfn