PDB entry 6qgl

View 6qgl on RCSB PDB site
Description: crystal structure of vp5 from haloarchaeal pleomorphic virus 6
Deposited on 2019-01-11, released 2019-02-27
The last revision was dated 2019-02-27, with a file datestamp of 2019-02-22.
Experiment type: XRAY
Resolution: 2.69 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vp5
    Species: Halorubrum pleomorphic virus 6 [TaxId:1156721]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: vp5
    Species: Halorubrum pleomorphic virus 6 [TaxId:1156721]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: BR, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6qglA (A:)
iaplvgyaigaaaisavggigvgwtlrefevvgsddpaegltpdvlrnqlsdsvvkrksn
nqstmvdnqnildgvehtayteakiaaieelnagssesavlsaansaidsyettvrtnfy
kswnetvreleamtqtviahadvglsyitdfgdprfgnlasgtspntlkdttvsmpdgtn
ftlltfrhntgwdsgnaaysvveynpkevvtstnsntyntvdgtqymkfsewnavetemd
tvfqnvrngistwvtnvygdvqsgaieisdlvtpreratmmaqeegmsqaiadlialnvp
vdaereatitiqdtgatlpgtfaltdssdgplsagqtydpstfsgdvyftadmslvegpw
dainsgvdggtititsepyegtaievttvesetvsvpaadwtdngdgtwsydasgdlett
itnvdsarfvstatettydtlqlkgaftvdklvnkqsgeevsstsftssepqtdsnyitq
dewdqleqqnkeliekyeqsqsgggldlggld

    Sequence, based on observed residues (ATOM records):
    >6qglA (A:)
aigaaaisavggigvgwtlrefevvgsddpaegltpdvlrnqlsdsvvkrksnnqstmvd
nqnildgvehtayteakiaaieelnagssesavlsaansaidsyettvrtnfykswnetv
releamtqtviahadvglsyitdfgdprfgnlasgtspntlkdttvsmpdgtnftlltfr
hntgwdsgnaaysvveynpkevvtstnsntyntvdgtqymkfsewnavetemdtvfqnvr
ngistwvtnvygdvqsgaieisdlvtpreratmmaqeegmsqaiadlialnvpvdaerea
titiqdtgatlpgtfaltdssdgplsagqtydpstfsgdvyftadmslvegpwdainsgv
dggtititsepyegtaievttvesetvsvpaadwtdngdgtwsydasgdlettitnvdsa
rfvstatettydtlqlkgaftvdklvnkqsgeevsstsftssepqtdsnyitqdewdqle
qqnkeliekye

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6qglB (B:)
iaplvgyaigaaaisavggigvgwtlrefevvgsddpaegltpdvlrnqlsdsvvkrksn
nqstmvdnqnildgvehtayteakiaaieelnagssesavlsaansaidsyettvrtnfy
kswnetvreleamtqtviahadvglsyitdfgdprfgnlasgtspntlkdttvsmpdgtn
ftlltfrhntgwdsgnaaysvveynpkevvtstnsntyntvdgtqymkfsewnavetemd
tvfqnvrngistwvtnvygdvqsgaieisdlvtpreratmmaqeegmsqaiadlialnvp
vdaereatitiqdtgatlpgtfaltdssdgplsagqtydpstfsgdvyftadmslvegpw
dainsgvdggtititsepyegtaievttvesetvsvpaadwtdngdgtwsydasgdlett
itnvdsarfvstatettydtlqlkgaftvdklvnkqsgeevsstsftssepqtdsnyitq
dewdqleqqnkeliekyeqsqsgggldlggld

    Sequence, based on observed residues (ATOM records):
    >6qglB (B:)
egltpdvlrnqlsdsvvkrksnnqstmvdnqnildgvehtayteakiaaieelnagsses
avlsaansaidsyettvrtnfykswnetvreleamtqtviahadvglsyitdfgdprfgn
lasgtspntlkdttvsmpdgtnftlltfrhntgwdsgnaaysvveynpkevvtstnsnty
ntvdgtqymkfsewnavetemdtvfqnvrngistwvtnvygdqnkelie