PDB entry 6q2q

View 6q2q on RCSB PDB site
Description: crystal structure of mouse viperin bound to uridine triphosphate and s-adenosylhomocysteine
Deposited on 2019-08-08, released 2020-01-22
The last revision was dated 2020-02-26, with a file datestamp of 2020-02-21.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Radical S-adenosyl methionine domain-containing protein 2
    Species: Mus musculus [TaxId:10090]
    Gene: Rsad2, Vig1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8CBB9
      • engineered mutation (216)
      • engineered mutation (221)
  • Chain 'B':
    Compound: Radical S-adenosyl methionine domain-containing protein 2
    Species: Mus musculus [TaxId:10090]
    Gene: Rsad2, Vig1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8CBB9 (Start-317)
      • conflict (25)
      • engineered mutation (216)
      • engineered mutation (221)
  • Heterogens: UTP, SF4, SAH, CL, B3P, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6q2qA (A:)
gkeqpqvrgeleetqetqedgnstqrttpvsvnyhftrqcnykcgfcfhtaktsfvlple
eakrgllllkqaglekinfsggepflqdrgeylgklvrfckeelalpsvsivsngslire
rwfkdygeyldilaiscdsfdeqvnaligrgqgkknhvenlqklrrwcrdykvafkinsv
inrfnvdedmnehikalspvrwkvfqclliegensgadalraaerflisneefetflerh
kevsclvpesnqkmkdsylildeymrflnctggrkdpsksildvgveeaikfsgfdekmf
lkrggkyvwskadlkldw

    Sequence, based on observed residues (ATOM records):
    >6q2qA (A:)
ttpvsvnyhftrqcnykcgfcfhtaktsfvlpleeakrgllllkqaglekinfsggepfl
qdrgeylgklvrfckeelalpsvsivsngslirerwfkdygeyldilaiscdsfdeqvna
ligrgqgkknhvenlqklrrwcrdykvafkinsvinrfnvdedmnehikalspvrwkvfq
clliegensgadalraaerflisneefetflerhkevsclvpesnqkmkdsylildeymr
flnctggrkdpsksildvgveeaikfsgfdekmflkrggkyvwskadlkl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6q2qB (B:)
gkeqpqvrgeleetqetqedgnstqrttpvsvnyhftrqcnykcgfcfhtaktsfvlple
eakrgllllkqaglekinfsggepflqdrgeylgklvrfckeelalpsvsivsngslire
rwfkdygeyldilaiscdsfdeqvnaligrgqgkknhvenlqklrrwcrdykvafkinsv
inrfnvdedmnehikalspvrwkvfqclliegensgadalraaerflisneefetflerh
kevsclvpesnqkmkdsylildeymrflnctggrkdpsksildvgveeaikfsgfdekmf
lkrggkyvwskadlkldw

    Sequence, based on observed residues (ATOM records):
    >6q2qB (B:)
rttpvsvnyhftrqcnykcgfcfhtaktsfvlpleeakrgllllkqaglekinfsggepf
lqdrgeylgklvrfckeelalpsvsivsngslirerwfkdygeyldilaiscdsfdeqvn
aligrgqnhvenlqklrrwcrdykvafkinsvinrfnvdedmnehikalspvrwkvfqcl
liegensgadalraaerflisneefetflerhkevsclvpesnqkmkdsylildeymrfl
nctggrkdpsksildvgveeaikfsgfdekmflkrggkyvwskadlkldw