PDB entry 6q0x

View 6q0x on RCSB PDB site
Description: the cryo-em structure of the snx-bar mvp1 tetramer
Deposited on 2019-08-02, released 2020-04-01
The last revision was dated 2020-04-01, with a file datestamp of 2020-03-27.
Experiment type: EM
Resolution: 4.2 Å
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sorting nexin MVP1
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Gene: MVP1, YMR004W, YM8270.06
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Sorting nexin MVP1
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Gene: MVP1, YMR004W, YM8270.06
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Sorting nexin MVP1
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Gene: MVP1, YMR004W, YM8270.06
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Sorting nexin MVP1
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Gene: MVP1, YMR004W, YM8270.06
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6q0xA (A:)
mgsshhhhhhssglvprgshmdnyegsdpwntssnawtkdddhvvsttnsepslngisge
fntlnfstpldtneedtgflptndvleesiwddsrnplgatgmsqtpniaanetvidknd
ardqnieeseadlldwtnnvrktyrpldadiiiieeiperegllfkhanylvkhlialps
tspseertvvrrysdflwlreillkrypfrmipelppkrigsqnadqlflkkrriglsrf
inlvmkhpklsnddlvltfltvrtdltswrkqatydtsnefadkkisqefmkmwkkefae
qwnqaascidtsmelwyritlllerhekrimqmvhernffetlvdnfsevtpklypvqqn
dtildinnnlsiikkhlettssickqeteeisgtlspkfkiftdillslrslferykima
annvvelqrhvelnkeklesmkgkpdvsgaeydrikkiiqkdrrsiieqsnrawlirqci
leeftifqetqflitrafqdwaklnsnhaglklneweklvtsimdmpisre

    Sequence, based on observed residues (ATOM records):
    >6q0xA (A:)
adiiiieeiperegllfkhanylvkhlialpstspseertvvrrysdflwlreillkryp
frmipelppkrigsqnadqlflkkrriglsrfinlvmkhpklsnddlvltfltvrtdlts
wrkqatydtsnefadkkisqefmkmwkkefaeqwnqaascidtsmelwyritlllerhek
rimqmvhernffetlvdnfsevtpklypvqqndtildinnnlsiikkhlettssickqet
eeisgtlspkfkiftdillslrslferykimaannvvelqrhvelnkeklesmkgkpdvs
gaeydrikkiiqkdrrsiieqsnrawlirqcileeftifqetqflitrafqdwaklnsnh
aglklneweklvt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6q0xB (B:)
mgsshhhhhhssglvprgshmdnyegsdpwntssnawtkdddhvvsttnsepslngisge
fntlnfstpldtneedtgflptndvleesiwddsrnplgatgmsqtpniaanetvidknd
ardqnieeseadlldwtnnvrktyrpldadiiiieeiperegllfkhanylvkhlialps
tspseertvvrrysdflwlreillkrypfrmipelppkrigsqnadqlflkkrriglsrf
inlvmkhpklsnddlvltfltvrtdltswrkqatydtsnefadkkisqefmkmwkkefae
qwnqaascidtsmelwyritlllerhekrimqmvhernffetlvdnfsevtpklypvqqn
dtildinnnlsiikkhlettssickqeteeisgtlspkfkiftdillslrslferykima
annvvelqrhvelnkeklesmkgkpdvsgaeydrikkiiqkdrrsiieqsnrawlirqci
leeftifqetqflitrafqdwaklnsnhaglklneweklvtsimdmpisre

    Sequence, based on observed residues (ATOM records):
    >6q0xB (B:)
adiiiieeiperegllfkhanylvkhlialpstspseertvvrrysdflwlreillkryp
frmipelppkrigsqnadqlflkkrriglsrfinlvmkhpklsnddlvltfltvrtdlts
wrkqatydtsnefadkkisqefmkmwkkefaeqwnqaascidtsmelwyritlllerhek
rimqmvhernffetlvdnfsevtpklypvqqndtildinnnlsiikkhlettssickqet
eeisgtlspkfkiftdillslrslferykimaannvvelqrhvelnkeklesmkgkpdvs
gaeydrikkiiqkdrrsiieqsnrawlirqcileeftifqetqflitrafqdwaklnsnh
aglklneweklvt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6q0xC (C:)
mgsshhhhhhssglvprgshmdnyegsdpwntssnawtkdddhvvsttnsepslngisge
fntlnfstpldtneedtgflptndvleesiwddsrnplgatgmsqtpniaanetvidknd
ardqnieeseadlldwtnnvrktyrpldadiiiieeiperegllfkhanylvkhlialps
tspseertvvrrysdflwlreillkrypfrmipelppkrigsqnadqlflkkrriglsrf
inlvmkhpklsnddlvltfltvrtdltswrkqatydtsnefadkkisqefmkmwkkefae
qwnqaascidtsmelwyritlllerhekrimqmvhernffetlvdnfsevtpklypvqqn
dtildinnnlsiikkhlettssickqeteeisgtlspkfkiftdillslrslferykima
annvvelqrhvelnkeklesmkgkpdvsgaeydrikkiiqkdrrsiieqsnrawlirqci
leeftifqetqflitrafqdwaklnsnhaglklneweklvtsimdmpisre

    Sequence, based on observed residues (ATOM records):
    >6q0xC (C:)
adiiiieeiperegllfkhanylvkhlialpstspseertvvrrysdflwlreillkryp
frmipelppkrigsqnadqlflkkrriglsrfinlvmkhpklsnddlvltfltvrtdlts
wrkqatydtsnefadkkisqefmkmwkkefaeqwnqaascidtsmelwyritlllerhek
rimqmvhernffetlvdnfsevtpklypvqqndtildinnnlsiikkhlettssickqet
eeisgtlspkfkiftdillslrslferykimaannvvelqrhvelnkeklesmkgkpdvs
gaeydrikkiiqkdrrsiieqsnrawlirqcileeftifqetqflitrafqdwaklnsnh
aglklneweklvt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6q0xD (D:)
mgsshhhhhhssglvprgshmdnyegsdpwntssnawtkdddhvvsttnsepslngisge
fntlnfstpldtneedtgflptndvleesiwddsrnplgatgmsqtpniaanetvidknd
ardqnieeseadlldwtnnvrktyrpldadiiiieeiperegllfkhanylvkhlialps
tspseertvvrrysdflwlreillkrypfrmipelppkrigsqnadqlflkkrriglsrf
inlvmkhpklsnddlvltfltvrtdltswrkqatydtsnefadkkisqefmkmwkkefae
qwnqaascidtsmelwyritlllerhekrimqmvhernffetlvdnfsevtpklypvqqn
dtildinnnlsiikkhlettssickqeteeisgtlspkfkiftdillslrslferykima
annvvelqrhvelnkeklesmkgkpdvsgaeydrikkiiqkdrrsiieqsnrawlirqci
leeftifqetqflitrafqdwaklnsnhaglklneweklvtsimdmpisre

    Sequence, based on observed residues (ATOM records):
    >6q0xD (D:)
adiiiieeiperegllfkhanylvkhlialpstspseertvvrrysdflwlreillkryp
frmipelppkrigsqnadqlflkkrriglsrfinlvmkhpklsnddlvltfltvrtdlts
wrkqatydtsnefadkkisqefmkmwkkefaeqwnqaascidtsmelwyritlllerhek
rimqmvhernffetlvdnfsevtpklypvqqndtildinnnlsiikkhlettssickqet
eeisgtlspkfkiftdillslrslferykimaannvvelqrhvelnkeklesmkgkpdvs
gaeydrikkiiqkdrrsiieqsnrawlirqcileeftifqetqflitrafqdwaklnsnh
aglklneweklvt