PDB entry 6q0e

View 6q0e on RCSB PDB site
Description: Inferred precursor (UCA) of the human antibody lineage 652 in complex with influenza hemagglutinin head domain of A/Beijing/262/95(H1N1)
Class: immune system
Keywords: antibody, IMMUNE SYSTEM
Deposited on 2019-08-01, released 2019-12-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/Beijing/262/1995(H1N1)) [TaxId:518922]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Gene: IGH
    Database cross-references and differences (RAF-indexed):
    • PDB 6Q0E
    Domains in SCOPe 2.08: d6q0eh1, d6q0eh2
  • Chain 'L':
    Compound: Fab Lambda Light Chain
    Species: Homo sapiens [TaxId:9606]
    Gene: Igl
    Database cross-references and differences (RAF-indexed):
    • PDB 6Q0E
    Domains in SCOPe 2.08: d6q0el1, d6q0el2
  • Heterogens: GOL, 2PE, MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6q0eH (H:)
asqvqlqesgpglvkpsgtlsltcavsggsisssnwwswvrqppgkglewigeiyhsgst
nynpslksrvtisvdksknqfslklssvtaadtavyycarappycsstscpddyyyyymd
vwgkgttvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgalts
gvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkhhh
hhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6q0eH (H:)
qvqlqesgpglvkpsgtlsltcavsggsisssnwwswvrqppgkglewigeiyhsgstny
npslksrvtisvdksknqfslklssvtaadtavyycarappycsstscpddyyyyymdvw
gkgttvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgv
htfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6q0eL (L:)
assseltqdpavsvalgqtvritcqgdslrsyyaswyqqkpgqapvlviygknnrpsgip
drfsgsssgntasltitgaqaedeadyycnsrdssgnhpvvfgggtkltvlgqpkgapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >6q0eL (L:)
seltqdpavsvalgqtvritcqgdslrsyyaswyqqkpgqapvlviygknnrpsgipdrf
sgsssgntasltitgaqaedeadyycnsrdssgnhpvvfgggtkltvlgqpkgapsvtlf
ppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassyl
sltpeqwkshrsyscqvthegstvektvapte