PDB entry 6pth

View 6pth on RCSB PDB site
Description: crystal structure of a dnan sliding clamp (dna polymerase iii subunit beta) from pseudomonas aeruginosa bound to griselimycin
Deposited on 2019-07-15, released 2019-08-07
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta sliding clamp
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: dnaN, PA0002
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9I7C4 (96-462)
      • expression tag (94-95)
  • Chain 'G':
    Compound: griselimycin
    Species: STREPTOMYCES GRISEUS, synthetic [TaxId:1911]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PTH (Start-9)
  • Heterogens: ACE, MLU, MP8, MVA, NZC, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6pthA (A:)
mghhhhhhsgevkpevkpethinlkvsdgsseiffkikkttplrrlmeafakrqgkemds
lrflydgiriqadqtpedldmedndiieahreqiggmhftiqreallkplqlvagvverr
qtlpvlsnvllvvegqqlsltgtdlevelvgrvvledaaepgeitvparklmdickslpn
dvlidirveeqkllvkagrsrftlstlpandfptveegpgslnfsiaqsklrrlidrtsf
amaqqdvryylngmllevnggtlrsvatdghrlamcsldaqipsqdrhqvivprkgilel
arllteqdgevgivlgqhhirattgeftftsklvdgkfpdyervlprggdklvvgdrqql
reafsrtailsnekyrgirlqlsngllkiqannpeqeeaeeevqveynggnleigfnvsy
lldvlgvigteqvrfilsdsnssalvheadnddsayvvmpmrl

    Sequence, based on observed residues (ATOM records):
    >6pthA (A:)
ggmhftiqreallkplqlvagvverrqtlpvlsnvllvvegqqlsltgtdlevelvgrvv
ledaaepgeitvparklmdickslpndvlidirveeqkllvkagrsrftlstlpandfpt
veegpgslnfsiaqsklrrlidrtsfamaqqdvryylngmllevnggtlrsvatdghrla
mcsldaqipsqdrhqvivprkgilelarllteqdgevgivlgqhhirattgeftftsklv
dgkfpdyervlprggdklvvgdrqqlreafsrtailsnekyrgirlqlsngllkiqannp
eqeeaeeevqveynggnleigfnvsylldvlgvigteqvrfilsdsnssalvheadndds
ayvvmpmrl

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6pthG (G:)
vxxlxlvpxg