PDB entry 6psp

View 6psp on RCSB PDB site
Description: Adenylate kinase from Methanococcus igneus - AP5A bound form
Class: transferase
Keywords: adenylate kinase, TRANSFERASE
Deposited on 2019-07-13, released 2020-07-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-23, with a file datestamp of 2020-09-18.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pspa_
  • Chain 'B':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pspb_
  • Chain 'C':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pspc_
  • Chain 'D':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pspd_
  • Chain 'E':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pspe_
  • Chain 'F':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pspf_
  • Heterogens: AP5, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6pspA (A:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pspA (A:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6pspB (B:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pspB (B:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6pspC (C:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pspC (C:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6pspD (D:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pspD (D:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6pspE (E:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pspE (E:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6pspF (F:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pspF (F:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk