PDB entry 6prg

View 6prg on RCSB PDB site
Description: sbp rafe in complex with stachyose
Deposited on 2019-07-10, released 2019-10-02
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ABC transporter sugar-binding protein
    Species: Streptococcus pneumoniae TIGR4 [TaxId:170187]
    Gene: SP_1897
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ABC transporter sugar-binding protein
    Species: Streptococcus pneumoniae TIGR4 [TaxId:170187]
    Gene: SP_1897
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GLA, GLC, FRU, CIT, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6prgA (A:)
mgsshhhhhhssglvprgshsnygksadgtvtieyfnqkkemtktleeitrdfekenpki
kvkvvnvpnagevlktrvlagdvpdvvniypqsielqewakagvfedlsnkdylkrvkng
yaekyavnekvynvpftanaygiyynkdkfeelglkvpetwdefeqlvkdivakgqtpfg
iagadawtlngynqlafatatgggkeanqylrysqpnaiklsdpimkddikvmdilring
skqknwegagytdvigafargdvlmtpngswaitaineqkpnfkigtfmipgkekgqslt
vgagdlawsisattkhpkeanafveymtrpevmqkyydvdgsptaiegvkqagedsplag
mteyaftdrhlvwlqqywtseadfhtltmnyvltgdkqgmvndlnaffnpmkadvd

    Sequence, based on observed residues (ATOM records):
    >6prgA (A:)
dgtvtieyfnqkkemtktleeitrdfekenpkikvkvvnvpnagevlktrvlagdvpdvv
niypqsielqewakagvfedlsnkdylkrvkngyaekyavnekvynvpftanaygiyynk
dkfeelglkvpetwdefeqlvkdivakgqtpfgiagadawtlngynqlafatatgggkea
nqylrysqpnaiklsdpimkddikvmdilringskqknwegagytdvigafargdvlmtp
ngswaitaineqkpnfkigtfmipgkekgqsltvgagdlawsisattkhpkeanafveym
trpevmqkyydvdgsptaiegvkqagedsplagmteyaftdrhlvwlqqywtseadfhtl
tmnyvltgdkqgmvndlnaffnpmka

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6prgB (B:)
mgsshhhhhhssglvprgshsnygksadgtvtieyfnqkkemtktleeitrdfekenpki
kvkvvnvpnagevlktrvlagdvpdvvniypqsielqewakagvfedlsnkdylkrvkng
yaekyavnekvynvpftanaygiyynkdkfeelglkvpetwdefeqlvkdivakgqtpfg
iagadawtlngynqlafatatgggkeanqylrysqpnaiklsdpimkddikvmdilring
skqknwegagytdvigafargdvlmtpngswaitaineqkpnfkigtfmipgkekgqslt
vgagdlawsisattkhpkeanafveymtrpevmqkyydvdgsptaiegvkqagedsplag
mteyaftdrhlvwlqqywtseadfhtltmnyvltgdkqgmvndlnaffnpmkadvd

    Sequence, based on observed residues (ATOM records):
    >6prgB (B:)
dgtvtieyfnqkkemtktleeitrdfekenpkikvkvvnvpnagevlktrvlagdvpdvv
niypqsielqewakagvfedlsnkdylkrvkngyaekyavnekvynvpftanaygiyynk
dkfeelglkvpetwdefeqlvkdivakgqtpfgiagadawtlngynqlafatatgggkea
nqylrysqpnaiklsdpimkddikvmdilringskqknwegagytdvigafargdvlmtp
ngswaitaineqkpnfkigtfmipgkekgqsltvgagdlawsisattkhpkeanafveym
trpevmqkyydvdgsptaiegvkqagedsplagmteyaftdrhlvwlqqywtseadfhtl
tmnyvltgdkqgmvndlnaffnpmka