PDB entry 6pl5

View 6pl5 on RCSB PDB site
Description: structural coordination of polymerization and crosslinking by a peptidoglycan synthase complex
Deposited on 2019-06-30, released 2020-03-18
The last revision was dated 2020-06-10, with a file datestamp of 2020-06-05.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidoglycan glycosyltransferase RodA
    Species: Thermus thermophilus HB8 [TaxId:300852]
    Gene: rodA, TTHA1241
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Penicillin-binding protein 2/cell division protein FtsI
    Species: Thermus thermophilus HB8 [TaxId:300852]
    Gene: TTHA1191
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5SJ23 (2-575)
      • expression tag (1)
      • expression tag (576-580)
  • Chain 'D':
    Compound: Unknown peptide
    Species: Thermus thermophilus HB8 [TaxId:300852]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PL5 (0-10)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6pl5A (A:)
dykddddlevlfqgpggssaparpnwlaydwglvflvaaivalgfvnlgsaapdpvllyr
qsvalglglllafllqflsrrrlfglayplygasllllalvlvvgreingarawfvlgpl
qfqplelaklglllalakalegrpiarvwdyalpalltlpvvgllllqpdlggalvvlfg
vfvvvfvrglpwrhllvglfalallvptavwpnlkpyqrervlivldpyrdplgqgfqvi
qstiaigsgglfgkgygqgtqaqlgfipfrhtdfvfsvwaeewgfvgvvgllglygllla
rlfalalacprlsdrlflsgfagmlgfqvvvnlgvalgvmpvtgltlplfsyggssliat
laglglvllvhrdryqd

    Sequence, based on observed residues (ATOM records):
    >6pl5A (A:)
wlaydwglvflvaaivalgfvnlgsaapdpvllyrqsvalglglllafllqflsrrrlfg
layplygasllllalvlvvgreingarawfvlgplqfqplelaklglllalakalegrpi
arvwdyalpalltlpvvgllllqpdlggalvvlfgvfvvvfvrglpwrhllvglfalall
vptavwpnlkpyqrervlivldpyrdplgqgfqviqstiaigsggipfrhtdfvfsvwae
ewgfvgvvgllglyglllarlfalalacprlsdrlflsgfagmlgfqvvvnlgvalgvmp
vtgltlplfsyggssliatlaglglvllvhrdryqd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6pl5B (B:)
mgtgrihalalffalalfllglrawqlqvleyeryalrsqgnylktedipaprgkildrk
grvlaqdrlvvdlvytggevafkerllpllgledlpqvteptvlkagvpealrptleelt
agqknlylrerieryypnpisgpvmgyvlranaaqvkqgyspeeevgqagleaalepylr
gkrgvravevnvrgerlretvleeptpgqdvvltldlalqraaekaleealadinagrrl
nglpeekqvkgaivaldpttgevlamasapsfdpnlfakrpvpeeakalledknlpllnr
avqpytpgstfklatsyalleegyvtpattyrcspyivfggqvrrnwasrdmgpmtvrea
iawscntwyyqavaqdplgfvdrlarrarllglgeatglevaektgllptrawkrealge
pwypgetlsvaigqgavlatpaqiarmlatiatggnkpalhlvkaiggvpvqprwekvpg
rywkvlqeglrktvsegtarfvlgefpvptggktgtaetpgkrrglehawymgygptdgs
pypplvvvaffenggegsrvalpavrkvmaaywgikgslevlfqgpedqvdprlidgk

    Sequence, based on observed residues (ATOM records):
    >6pl5B (B:)
gtgrihalalffalalfllglrawqlqvleyeryalrsqgnylktedipaprgkildrkg
rvlaqdrlvvdlvytggevafkerllpllgledlpqvteptvlkagvpealrptleelta
gqknlylrerieryypnpisgpvmgyvlranaaqvkqgyspeeevgqagleaalepylrg
krgvravevnvrgerlretvleeptpgqdvvltldlalqraaekaleealadinagrrln
glpeekqvkgaivaldpttgevlamasapsfdpnlfakrpvpeeakalledknlpllnra
vqpytpgstfklatsyalleegyvtpattyrcspyivfggqvrrnwasrdmgpmtvreai
awscntwyyqavaqdplgfvdrlarrarllglgeatglevaektgllptrawkreapwyp
getlsvaigqgavlatpaqiarmlatiatggnkpalhlvkaiggvpvqprwekvpgrywk
vlqeglrktvsegtarfvlgefpvptggktgtaetpgkrrglehawymgygptdgspypp
lvvvaffenggegsrvalpavrkvmaaywgikgslev

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6pl5D (D:)
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