PDB entry 6pjw

View 6pjw on RCSB PDB site
Description: Adenylate kinase from Methanococcus igneus - AMP bound form
Class: transferase
Keywords: adenylate kinase, TRANSFERASE
Deposited on 2019-06-28, released 2020-01-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-23, with a file datestamp of 2020-09-18.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwa_
  • Chain 'B':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwb_
  • Chain 'C':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwc_
  • Chain 'D':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwd_
  • Chain 'E':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwe_
  • Chain 'F':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwf_
  • Chain 'G':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwg_
  • Chain 'H':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwh_
  • Chain 'I':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwi_
  • Chain 'J':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwj_
  • Chain 'K':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwk_
  • Chain 'L':
    Compound: adenylate kinase
    Species: Methanotorris igneus [TaxId:2189]
    Gene: adkA, adk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pjwl_
  • Heterogens: AMP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6pjwA (A:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwA (A:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6pjwB (B:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwB (B:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6pjwC (C:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwC (C:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6pjwD (D:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwD (D:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6pjwE (E:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwE (E:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6pjwF (F:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwF (F:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6pjwG (G:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwG (G:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6pjwH (H:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwH (H:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >6pjwI (I:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwI (I:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >6pjwJ (J:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwJ (J:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >6pjwK (K:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwK (K:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >6pjwL (L:)
    mknkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmr
    kldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiivi
    vetssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdgll
    dkaveelisvlklehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pjwL (L:)
    knkvvvvtgvpgvggttltqktieklkeegieykmvnfgtvmfevakeeglvedrdqmrk
    ldpdtqkriqklagrkiaemakesnvivdthstvktpkgylaglpiwvleelnpdiiviv
    etssdeilmrrlgdatrnrdieltsdidehqfmnrcaamaygvltgatvkiiknrdglld
    kaveelisvlk