PDB entry 6phe

View 6phe on RCSB PDB site
Description: Crystal structure of Methylglyoxal synthase from Elizabethkingia anophelis NUHP1
Class: lyase
Keywords: SSGCID, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, NUHP1, LYASE
Deposited on 2019-06-25, released 2019-07-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phea_
  • Chain 'B':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pheb_
  • Chain 'C':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phec_
  • Chain 'D':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phed_
  • Chain 'E':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phee_
  • Chain 'F':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phef_
  • Chain 'G':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pheg_
  • Chain 'H':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6pheh_
  • Chain 'I':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phei_
  • Chain 'J':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phej_
  • Chain 'K':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phek_
  • Chain 'L':
    Compound: methylglyoxal synthase
    Species: Elizabethkingia anophelis NUHP1 [TaxId:1338011]
    Gene: mgsA, BD94_2272
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6phel_
  • Heterogens: PO4, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6pheA (A:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheA (A:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6pheB (B:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheB (B:)
    ksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkr
    vmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsat
    adfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6pheC (C:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheC (C:)
    ksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkr
    vmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsat
    adfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6pheD (D:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheD (D:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6pheE (E:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheE (E:)
    ksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkr
    vmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsat
    adfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6pheF (F:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheF (F:)
    ksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkr
    vmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsat
    adfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6pheG (G:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheG (G:)
    ksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkr
    vmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsat
    adfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6pheH (H:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheH (H:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >6pheI (I:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheI (I:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >6pheJ (J:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheJ (J:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >6pheK (K:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheK (K:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >6pheL (L:)
    mahhhhhhmksirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklie
    edlgvevkrvmsgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwn
    tpmacdsatadfilsspfmeteyqaeipdydgylkrnipea
    

    Sequence, based on observed residues (ATOM records): (download)
    >6pheL (L:)
    sirtlperktialvahdhkkddlvrwvqkhagkltkhnliatgttgklieedlgvevkrv
    msgplggdqqlgsmiaqrqidiviffwdpmeaqphdsdvkafirlcvvwntpmacdsata
    dfilsspfmeteyqaeipdydgylkrnipea