PDB entry 6pgl

View 6pgl on RCSB PDB site
Description: structure of kluyveromyces marxianus usb1 with uridine monophosphate
Deposited on 2019-06-24, released 2019-12-11
The last revision was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein YLR132C
    Species: Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) [TaxId:1003335]
    Gene: KLMA_50491
    Database cross-references and differences (RAF-indexed):
    • Uniprot W0TCJ5 (1-217)
      • initiating methionine (0)
      • conflict (121)
      • conflict (170)
  • Chain 'B':
    Compound: Uncharacterized protein YLR132C
    Species: Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) [TaxId:1003335]
    Gene: KLMA_50491
    Database cross-references and differences (RAF-indexed):
    • Uniprot W0TCJ5 (Start-217)
      • conflict (121)
      • conflict (170)
  • Chain 'C':
    Compound: Uncharacterized protein YLR132C
    Species: Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) [TaxId:1003335]
    Gene: KLMA_50491
    Database cross-references and differences (RAF-indexed):
    • Uniprot W0TCJ5 (Start-217)
      • conflict (121)
      • conflict (170)
  • Heterogens: U5P, GOL, PGE, EDO, PG6, PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6pglA (A:)
mvapvsknigflflelrldskqqqimdlvlkgvnavmdthhrnsfeplhrgkfgamkplh
vslsetmmfaneseleekmgrirqeiralecksvpvalsggwlvyenfdaslqflavgls
epargrlkpvlsivekykprspvsrqpvglnnlhvsfgvaqnaylqqdesvsrqrldslr
nlvateasdrlpllranlqfrchelkakvgtsvitlpl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6pglB (B:)
mvapvsknigflflelrldskqqqimdlvlkgvnavmdthhrnsfeplhrgkfgamkplh
vslsetmmfaneseleekmgrirqeiralecksvpvalsggwlvyenfdaslqflavgls
epargrlkpvlsivekykprspvsrqpvglnnlhvsfgvaqnaylqqdesvsrqrldslr
nlvateasdrlpllranlqfrchelkakvgtsvitlpl

    Sequence, based on observed residues (ATOM records):
    >6pglB (B:)
vsknigflflelrldskqqqimdlvlkgvnavmdthhrnsfeplhrgkfgamkplhvsls
etmmfaneseleekmgrirqeiralecksvpvalsggwlvyenfdaslqflavglsepar
grlkpvlsivekykprspvsrqpvglnnlhvsfgvaqnaylqqdesvsrqrldslrnlva
teasdrlpllranlqfrchelkakvgtsvitlpl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6pglC (C:)
mvapvsknigflflelrldskqqqimdlvlkgvnavmdthhrnsfeplhrgkfgamkplh
vslsetmmfaneseleekmgrirqeiralecksvpvalsggwlvyenfdaslqflavgls
epargrlkpvlsivekykprspvsrqpvglnnlhvsfgvaqnaylqqdesvsrqrldslr
nlvateasdrlpllranlqfrchelkakvgtsvitlpl

    Sequence, based on observed residues (ATOM records):
    >6pglC (C:)
pvsknigflflelrldskqqqimdlvlkgvnavmdthhrnsfeplhrgkfgamkplhvsl
setmmfaneseleekmgrirqeiralecksvpvalsggwlvyenfdaslqflavglsepa
rgrlkpvlsivekykprspvglnnlhvsfgvaqnaylqqdesvsrqrldslrnlvateas
drlpllranlqfrchelkakvgtsvitlpl