PDB entry 6peq

View 6peq on RCSB PDB site
Description: glua2 in complex with its auxiliary subunit cnih3 - map lbd-tmd-c3 - with antagonist zk200775 -without ntd
Deposited on 2019-06-20, released 2019-12-04
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 2.97 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Glutamate receptor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Gria2, Glur2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Protein cornichon homolog 3
    Species: Mus musculus [TaxId:10090]
    Gene: Cnih3
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Protein cornichon homolog 3
    Species: Mus musculus [TaxId:10090]
    Gene: Cnih3
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Protein cornichon homolog 3
    Species: Mus musculus [TaxId:10090]
    Gene: Cnih3
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Protein cornichon homolog 3
    Species: Mus musculus [TaxId:10090]
    Gene: Cnih3
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CLR, OLC, PAM, ZK1

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6peqA (A:)
mqkimhisvllspvlwglifgvssnsiqigglfprgadqeysafrvgmvqfstsefrltp
hidnlevansfavtnafcsqfsrgvyaifgfydkksvntitsfcgtlhvsfitpsfptdg
thpfviqmrpdlkgallslieyyqwdkfaylydsdrglstlqavldsaaekkwqvtainv
gninndkkdetyrslfqdlelkkerrvildcerdkvndivdqvitigkhvkgyhyiianl
gftdgdllkiqfgganvsgfqivdyddslvskfierwstleekeypgahtatikytsalt
ydavqvmteafrnlrkqrieisrrgnagdclanpavpwgqgveieralkqvqveglsgni
kfdqngkrinytinimelktngprkigywsevdkmvvtltelpsgndtsglenktvvvtt
ilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkygardadtki
wngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqkskpgvfsfld
playeiwmcivfayigvsvvlflvsrfspyewhteefedgretqssestnefgifnslwf
slgafmrqgcdisprslsgrivggvwwfftliiissytanlaafltvermvspiesaedl
skqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrkskgk
yayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklneqgll
dklknkwwydkgecgsgggdskektsalslsnvagvfyilvgglglamlvaliefcyksr
aeakrmkvaknpqninpsssqnsqnfatdykddddkegynvygiesvki

    Sequence, based on observed residues (ATOM records):
    >6peqA (A:)
enktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgky
gardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqks
kpgvfsfldplayeiwmcivfayigvsvvlflvsrfspslsgrivggvwwfftliiissy
tanlaafltvermvspiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrs
aepsvfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiat
pkgsslgnavnlavlklneqglldklknkwwydkgecgstsalslsnvagvfyilvgglg
lamlvaliefcyksraeakr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6peqB (B:)
mqkimhisvllspvlwglifgvssnsiqigglfprgadqeysafrvgmvqfstsefrltp
hidnlevansfavtnafcsqfsrgvyaifgfydkksvntitsfcgtlhvsfitpsfptdg
thpfviqmrpdlkgallslieyyqwdkfaylydsdrglstlqavldsaaekkwqvtainv
gninndkkdetyrslfqdlelkkerrvildcerdkvndivdqvitigkhvkgyhyiianl
gftdgdllkiqfgganvsgfqivdyddslvskfierwstleekeypgahtatikytsalt
ydavqvmteafrnlrkqrieisrrgnagdclanpavpwgqgveieralkqvqveglsgni
kfdqngkrinytinimelktngprkigywsevdkmvvtltelpsgndtsglenktvvvtt
ilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkygardadtki
wngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqkskpgvfsfld
playeiwmcivfayigvsvvlflvsrfspyewhteefedgretqssestnefgifnslwf
slgafmrqgcdisprslsgrivggvwwfftliiissytanlaafltvermvspiesaedl
skqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrkskgk
yayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklneqgll
dklknkwwydkgecgsgggdskektsalslsnvagvfyilvgglglamlvaliefcyksr
aeakrmkvaknpqninpsssqnsqnfatdykddddkegynvygiesvki

    Sequence, based on observed residues (ATOM records):
    >6peqB (B:)
tvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkygar
dadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqkskpg
vfsfldplayeiwmcivfayigvsvvlflvsrfspslsgrivggvwwfftliiissytan
laafltvermvspiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaep
svfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkg
sslgnavnlavlklneqglldklknkwwydkgecgtsalslsnvagvfyilvgglglaml
valiefcyksraeakr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6peqC (C:)
mqkimhisvllspvlwglifgvssnsiqigglfprgadqeysafrvgmvqfstsefrltp
hidnlevansfavtnafcsqfsrgvyaifgfydkksvntitsfcgtlhvsfitpsfptdg
thpfviqmrpdlkgallslieyyqwdkfaylydsdrglstlqavldsaaekkwqvtainv
gninndkkdetyrslfqdlelkkerrvildcerdkvndivdqvitigkhvkgyhyiianl
gftdgdllkiqfgganvsgfqivdyddslvskfierwstleekeypgahtatikytsalt
ydavqvmteafrnlrkqrieisrrgnagdclanpavpwgqgveieralkqvqveglsgni
kfdqngkrinytinimelktngprkigywsevdkmvvtltelpsgndtsglenktvvvtt
ilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkygardadtki
wngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqkskpgvfsfld
playeiwmcivfayigvsvvlflvsrfspyewhteefedgretqssestnefgifnslwf
slgafmrqgcdisprslsgrivggvwwfftliiissytanlaafltvermvspiesaedl
skqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrkskgk
yayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklneqgll
dklknkwwydkgecgsgggdskektsalslsnvagvfyilvgglglamlvaliefcyksr
aeakrmkvaknpqninpsssqnsqnfatdykddddkegynvygiesvki

    Sequence, based on observed residues (ATOM records):
    >6peqC (C:)
enktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgky
gardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqks
kpgvfsfldplayeiwmcivfayigvsvvlflvsrfspslsgrivggvwwfftliiissy
tanlaafltvermvspiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrs
aepsvfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiat
pkgsslgnavnlavlklneqglldklknkwwydkgecgstsalslsnvagvfyilvgglg
lamlvaliefcyksraeakr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6peqD (D:)
mqkimhisvllspvlwglifgvssnsiqigglfprgadqeysafrvgmvqfstsefrltp
hidnlevansfavtnafcsqfsrgvyaifgfydkksvntitsfcgtlhvsfitpsfptdg
thpfviqmrpdlkgallslieyyqwdkfaylydsdrglstlqavldsaaekkwqvtainv
gninndkkdetyrslfqdlelkkerrvildcerdkvndivdqvitigkhvkgyhyiianl
gftdgdllkiqfgganvsgfqivdyddslvskfierwstleekeypgahtatikytsalt
ydavqvmteafrnlrkqrieisrrgnagdclanpavpwgqgveieralkqvqveglsgni
kfdqngkrinytinimelktngprkigywsevdkmvvtltelpsgndtsglenktvvvtt
ilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkygardadtki
wngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqkskpgvfsfld
playeiwmcivfayigvsvvlflvsrfspyewhteefedgretqssestnefgifnslwf
slgafmrqgcdisprslsgrivggvwwfftliiissytanlaafltvermvspiesaedl
skqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvrkskgk
yayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslgnavnlavlklneqgll
dklknkwwydkgecgsgggdskektsalslsnvagvfyilvgglglamlvaliefcyksr
aeakrmkvaknpqninpsssqnsqnfatdykddddkegynvygiesvki

    Sequence, based on observed residues (ATOM records):
    >6peqD (D:)
tvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkygar
dadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkpqkskpg
vfsfldplayeiwmcivfayigvsvvlflvsrfspslsgrivggvwwfftliiissytan
laafltvermvspiesaedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaep
svfvrttaegvarvrkskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkg
sslgnavnlavlklneqglldklknkwwydkgecgtsalslsnvagvfyilvgglglaml
valiefcyksraeakr

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6peqE (E:)
maftfaafcymlslvlcaaliffaiwhiiafdelrtdfkspidqcnpvharerlrnieri
cfllrklvlpeysihslfcimflcaqewltlglnvpllfyhfwryfhcpadsselaydpp
vvmnadtlsycqkeawcklafyllsffyylycmiytlvssggrggtetsqvapa

    Sequence, based on observed residues (ATOM records):
    >6peqE (E:)
aftfaafcymlslvlcaaliffaiwhiiafdelrtdarerlrniericfllrklvlpeys
ihslfcimflcaqewltlglnvpllfyhfwryfhcpadtlsycqkeawcklafyllsffy
ylycmiytlvss

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6peqF (F:)
maftfaafcymlslvlcaaliffaiwhiiafdelrtdfkspidqcnpvharerlrnieri
cfllrklvlpeysihslfcimflcaqewltlglnvpllfyhfwryfhcpadsselaydpp
vvmnadtlsycqkeawcklafyllsffyylycmiytlvssggrggtetsqvapa

    Sequence, based on observed residues (ATOM records):
    >6peqF (F:)
aftfaafcymlslvlcaaliffaiwhiiafdelrtdfvharerlrniericfllrklvlp
eysihslfcimflcaqewltlglnvpllfyhfwryfhcnadtlsycqkeawcklafylls
ffyylycmiytlvs

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6peqG (G:)
maftfaafcymlslvlcaaliffaiwhiiafdelrtdfkspidqcnpvharerlrnieri
cfllrklvlpeysihslfcimflcaqewltlglnvpllfyhfwryfhcpadsselaydpp
vvmnadtlsycqkeawcklafyllsffyylycmiytlvssggrggtetsqvapa

    Sequence, based on observed residues (ATOM records):
    >6peqG (G:)
aftfaafcymlslvlcaaliffaiwhiiafdelrtdarerlrniericfllrklvlpeys
ihslfcimflcaqewltlglnvpllfyhfwryfhcpadtlsycqkeawcklafyllsffy
ylycmiytlvss

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6peqH (H:)
maftfaafcymlslvlcaaliffaiwhiiafdelrtdfkspidqcnpvharerlrnieri
cfllrklvlpeysihslfcimflcaqewltlglnvpllfyhfwryfhcpadsselaydpp
vvmnadtlsycqkeawcklafyllsffyylycmiytlvssggrggtetsqvapa

    Sequence, based on observed residues (ATOM records):
    >6peqH (H:)
aftfaafcymlslvlcaaliffaiwhiiafdelrtdfvharerlrniericfllrklvlp
eysihslfcimflcaqewltlglnvpllfyhfwryfhcnadtlsycqkeawcklafylls
ffyylycmiytlvs