PDB entry 6pec

View 6pec on RCSB PDB site
Description: vaccine-elicited nhp fp-targeting antibody df2f-e.01 in complex with hiv fusion peptide (residue 512-519)
Deposited on 2019-06-20, released 2020-06-24
The last revision was dated 2020-06-24, with a file datestamp of 2020-06-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HIV-1 fusion peptide residue 512-519
    Species: Human immunodeficiency virus 1, synthetic [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PEC (0-7)
  • Chain 'H':
    Compound: antibody heavy chain
    Species: MACACA MULATTA [TaxId:9544]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PEC (0-215)
  • Chain 'L':
    Compound: Antibody Light Chain
    Species: MACACA MULATTA [TaxId:9544]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PEC (0-207)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6pecA (A:)
avgigavf

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6pecH (H:)
qlqesgpgvvkpsetlsltcavsggtissgyyywswirqppgkglewiggtysnrestny
npslksrvtiskdtsknqfslklksvtaadtavyfcgregsgtwkgalddswgqgvlvtv
ssastkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglys
lssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6pecL (L:)
mtqspvslsasvgdtvtitcrasqgissylswyqqkpgkapklliydsttlqggvpsrfs
gsgsgteftltisslqpedfatyycqqyetypitfgggtkvdikrtvaapsvfifppsde
qlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlsk
adyekhkvyacevthqglsspvtksfnr