PDB entry 6pe2

View 6pe2 on RCSB PDB site
Description: drosophila p element transposase strand transfer complex
Deposited on 2019-06-19, released 2019-10-30
The last revision was dated 2020-01-08, with a file datestamp of 2020-01-03.
Experiment type: EM
Resolution: 4 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transposable element P transposase
    Species: Drosophila melanogaster [TaxId:7227]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Transposable element P transposase
    Species: Drosophila melanogaster [TaxId:7227]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA (5'-d(p*cp*gp*ap*ap*cp*tp*ap*tp*a)-3')
    Species: DROSOPHILA MELANOGASTER, synthetic [TaxId:7227]
  • Chain 'D':
    Compound: DNA (27-mer)
    Species: DROSOPHILA MELANOGASTER, synthetic [TaxId:7227]
  • Chain 'E':
    Compound: DNA (56-mer)
    Species: DROSOPHILA MELANOGASTER, synthetic [TaxId:7227]
  • Chain 'G':
    Compound: Transposable element P transposase
    Species: Drosophila melanogaster [TaxId:7227]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Transposable element P transposase
    Species: Drosophila melanogaster [TaxId:7227]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: DNA (5'-d(p*cp*gp*ap*ap*cp*tp*ap*tp*a)-3')
    Species: DROSOPHILA MELANOGASTER, synthetic [TaxId:7227]
  • Chain 'J':
    Compound: DNA (27-mer)
    Species: DROSOPHILA MELANOGASTER, synthetic [TaxId:7227]
  • Chain 'K':
    Compound: DNA (56-mer)
    Species: DROSOPHILA MELANOGASTER, synthetic [TaxId:7227]
  • Heterogens: GTP, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6pe2A (A:)
    mkyckfcckavtgvklihvpkcaikrklweqslgcslgensqicdthfndsqwkaapakg
    qtfkrrrlnadavpskviepepekikegytsgstqtescslfnenkslrekirtleyemr
    rleqqlresqqleeslrkiftdtqirilknggqratfnsddistaiclhtagpraynhly
    kkgfplpsrttlyrwlsdvdikrgcldvvidlmdsdgvddadklcvlafdemkvaaafey
    dssadivyepsdyvqlaivrglkkswkqpvffdfntrmdpdtlnnilrklhrkgylvvai
    vsdlgtgnqklwtelgisesktwfshpaddhlkifvfsdtphliklvrnhyvdsglting
    kkltkktiqealhlcnksdlsilfkinenhinvrslakqkvklatqlfsnttassirrcy
    slgydienatetadffklmndwfdifnsklstsnciecsqpygkqldiqndilnrmseim
    rtgildkpkrlpfqkgiivnnasldglykylqenfsmqyiltsrlnqdivehffgsmrsr
    ggqfdhptplqfkyrlrkyiiarntemlr
    

    Sequence, based on observed residues (ATOM records):
    >6pe2A (A:)
    tleyemrrleqqlresqqleeslrkiftdtqirilknggqratfnsddistaiclhtagp
    raynhlykkgfplpsrttlyrwlsdvdikrgcldvvidlmdsdgvddadklcvlafdemk
    vaaafeydssadivyepsdyvqlaivrglkkswkqpvffdfntrmdpdtlnnilrklhrk
    gylvvaivsdlgtgnqklwtelgisesktwfshpaddhlkifvfsdtphliklvrnhyvd
    sgltingkkltkktiqealhlcnksdlsilfkinenhinvrslakqkvklatqlfsntta
    ssirrcyslgydienatetadffklmndwfdifnsklstsnciecsqpygkqldiqndil
    nrmseimrtgildkpkrlpfqkgiivnnasldglykylqenfsmqyiltsrlnqdivehf
    fgsmrsrggqfdhptplqfkyrlrkyiiarntemlr
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6pe2B (B:)
    temdeltedameyiagyvikklrisdkvkenltftyvdevshgglikpsekfqeklkele
    ciflhytnnnnfeitnnvkeklilaarnvdvdkqvksfyfkiriyfrikyfnkkieiknq
    kqklignskllkikl
    

    Sequence, based on observed residues (ATOM records):
    >6pe2B (B:)
    temdeltedameyiagyvikklrisdkvkenltftyvdevshgglikpsekfqeklkele
    ciflhytnnnnfeitnnvkeklilaarnvdvdkqvksfyfkiriyfrikyfnkkieik
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6pe2G (G:)
    mkyckfcckavtgvklihvpkcaikrklweqslgcslgensqicdthfndsqwkaapakg
    qtfkrrrlnadavpskviepepekikegytsgstqtescslfnenkslrekirtleyemr
    rleqqlresqqleeslrkiftdtqirilknggqratfnsddistaiclhtagpraynhly
    kkgfplpsrttlyrwlsdvdikrgcldvvidlmdsdgvddadklcvlafdemkvaaafey
    dssadivyepsdyvqlaivrglkkswkqpvffdfntrmdpdtlnnilrklhrkgylvvai
    vsdlgtgnqklwtelgisesktwfshpaddhlkifvfsdtphliklvrnhyvdsglting
    kkltkktiqealhlcnksdlsilfkinenhinvrslakqkvklatqlfsnttassirrcy
    slgydienatetadffklmndwfdifnsklstsnciecsqpygkqldiqndilnrmseim
    rtgildkpkrlpfqkgiivnnasldglykylqenfsmqyiltsrlnqdivehffgsmrsr
    ggqfdhptplqfkyrlrkyiiarntemlr
    

    Sequence, based on observed residues (ATOM records):
    >6pe2G (G:)
    tleyemrrleqqlresqqleeslrkiftdtqirilknggqratfnsddistaiclhtagp
    raynhlykkgfplpsrttlyrwlsdvdikrgcldvvidlmdsdgvddadklcvlafdemk
    vaaafeydssadivyepsdyvqlaivrglkkswkqpvffdfntrmdpdtlnnilrklhrk
    gylvvaivsdlgtgnqklwtelgisesktwfshpaddhlkifvfsdtphliklvrnhyvd
    sgltingkkltkktiqealhlcnksdlsilfkinenhinvrslakqkvklatqlfsntta
    ssirrcyslgydienatetadffklmndwfdifnsklstsnciecsqpygkqldiqndil
    nrmseimrtgildkpkrlpfqkgiivnnasldglykylqenfsmqyiltsrlnqdivehf
    fgsmrsrggqfdhptplqfkyrlrkyiiarntemlr
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6pe2H (H:)
    temdeltedameyiagyvikklrisdkvkenltftyvdevshgglikpsekfqeklkele
    ciflhytnnnnfeitnnvkeklilaarnvdvdkqvksfyfkiriyfrikyfnkkieiknq
    kqklignskllkikl
    

    Sequence, based on observed residues (ATOM records):
    >6pe2H (H:)
    temdeltedameyiagyvikklrisdkvkenltftyvdevshgglikpsekfqeklkele
    ciflhytnnnnfeitnnvkeklilaarnvdvdkqvksfyfkiriyfrikyfnkkieik
    

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.