PDB entry 6pdq

View 6pdq on RCSB PDB site
Description: ancestral effector caspase 3/6/7
Deposited on 2019-06-19, released 2019-11-13
The last revision was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.83 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ancestral Effector Caspase-3/6/7
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PDQ
  • Chain 'B':
    Compound: Ancestral Effector Caspase-3/6/7
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PDQ (0-92)
  • Chain 'D':
    Compound: Ancestral Effector Caspase-3/6/7
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PDQ (0-141)
  • Chain 'E':
    Compound: Ancestral Effector Caspase-3/6/7
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PDQ (0-92)
  • Chain 'F':
    Compound: Ac-DEVD inhibitor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PDQ (Start-3)
  • Chain 'G':
    Compound: Ac-DEVD inhibitor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6PDQ (Start-3)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6pdqA (A:)
ldnsykmnhkrrglcliinnknfdrktgmktrngtdkdaenlektfkslgfevkvyndlt
aeemqetlqevskedhsdsdcfvcvllshgeeglvygtdgkieiqeltslfkgdkcqslv
gkpklffiqacrgdeldsgvev

    Sequence, based on observed residues (ATOM records):
    >6pdqA (A:)
dnsykmnhkrrglcliinnknfdrktgmktrngtdkdaenlektfkslgfevkvyndlta
eemqetlqevskedhsdsdcfvcvllshgeeglvygtdgkieiqeltslfkgdkcqslvg
kpklffiqacrgdeldsgv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6pdqB (B:)
hkipaeadfliaystapgyysyrntsngswfiqslcevlnkygseleimeiltrvnhkvs
lrsesssndpafngkkqmpcfasmltkklyfsp

    Sequence, based on observed residues (ATOM records):
    >6pdqB (B:)
hkipaeadfliaystapgyysyrntsngswfiqslcevlnkygseleimeiltrvnhkvs
lressfngkkqmpcfasmltkklyfsp

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6pdqD (D:)
ldnsykmnhkrrglcliinnknfdrktgmktrngtdkdaenlektfkslgfevkvyndlt
aeemqetlqevskedhsdsdcfvcvllshgeeglvygtdgkieiqeltslfkgdkcqslv
gkpklffiqacrgdeldsgvev

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6pdqE (E:)
hkipaeadfliaystapgyysyrntsngswfiqslcevlnkygseleimeiltrvnhkvs
lrsesssndpafngkkqmpcfasmltkklyfsp

    Sequence, based on observed residues (ATOM records):
    >6pdqE (E:)
hkipaeadfliaystapgyysyrntsngswfiqslcevlnkygseleimeiltrvnhkvs
lrsengkkqmpcfasmltkklyfsp

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6pdqF (F:)
devd

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6pdqG (G:)
devd