PDB entry 6pd4

View 6pd4 on RCSB PDB site
Description: crystal structure of hendra virus attachment g glycoprotein
Deposited on 2019-06-18, released 2019-11-27
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Attachment glycoprotein
    Species: Hendra henipavirus [TaxId:63330]
    Database cross-references and differences (RAF-indexed):
    • Uniprot F4YH71 (Start-433)
      • expression tag (434-440)
  • Chain 'B':
    Compound: Attachment glycoprotein
    Species: Hendra henipavirus [TaxId:63330]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6pd4A (A:)
yrpisqgvsdlvglpnqiclqkttstilkprlisytlpintregvcitdpllavdngffa
yshlekigsctrgiakqriigvgevldrgdkvpsmfmtnvwtppnpstihhcsstyhedf
yytlcavshvgdpilnstswteslslirlavrpksdsgdynqkyiaitkvergkydkvmp
ygpsgikqgdtlyfpavgflprtefqyndsncpiihckyskaencrlsmgvnskshyilr
sgllkynlslggdiilqfieiadnrltigspskiynslgqpvfyqasyswdtmiklgdvd
tvdplrvqwrnnsvisrpgqsqcprfnvcpevcwegtyndaflidrlnwvsagvylnsnq
taenpvfavfkdneilyqvplaeddtnaqktitdcfllenviwcislveiydtgdsvirp
klfavkipaqcsesgrglvpr

    Sequence, based on observed residues (ATOM records):
    >6pd4A (A:)
qgvsdlvglpnqiclqkttstilkprlisytlpintregvcitdpllavdngffayshle
kigsctrgiakqriigvgevldrgdkvpsmfmtnvwtppnpstihhcsstyhedfyytlc
avshvgdpilnstswteslslirlavrpksdsgdynqkyiaitkvergkydkvmpygpsg
ikqgdtlyfpavgflprtefqyndsncpiihckyskaencrlsmgvnskshyilrsgllk
ynlslggdiilqfieiadnrltigspskiynslgqpvfyqasyswdtmiklgdvdtvdpl
rvqwrnnsvisrpgqsqcprfnvcpevcwegtyndaflidrlnwvsagvylnsnqtaenp
vfavfkdneilyqvplaeddtnaqktitdcfllenviwcislveiydtgdsvirpklfav
kipaqcsesgrglvpr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6pd4B (B:)
yrpisqgvsdlvglpnqiclqkttstilkprlisytlpintregvcitdpllavdngffa
yshlekigsctrgiakqriigvgevldrgdkvpsmfmtnvwtppnpstihhcsstyhedf
yytlcavshvgdpilnstswteslslirlavrpksdsgdynqkyiaitkvergkydkvmp
ygpsgikqgdtlyfpavgflprtefqyndsncpiihckyskaencrlsmgvnskshyilr
sgllkynlslggdiilqfieiadnrltigspskiynslgqpvfyqasyswdtmiklgdvd
tvdplrvqwrnnsvisrpgqsqcprfnvcpevcwegtyndaflidrlnwvsagvylnsnq
taenpvfavfkdneilyqvplaeddtnaqktitdcfllenviwcislveiydtgdsvirp
klfavkipaqcsesgrglvpr

    Sequence, based on observed residues (ATOM records):
    >6pd4B (B:)
qgvsdlvglpnqiclqkttstilkprlisytlpintregvcitdpllavdngffayshle
kigsctrgiakqriigvgevldrgdkvpsmfmtnvwtppnpstihhcsstyhedfyytlc
avshvgdpilnstswteslslirlavrpksdsgdynqkyiaitkvergkydkvmpygpsg
ikqgdtlyfpavgflprtefqyndsncpiihckyskaencrlsmgvnskshyilrsgllk
ynlslggdiilqfieiadnrltigspskiynslgqpvfyqasyswdtmiklgdvdtvdpl
rvqwrnnsvisrpgqsqcprfnvcpevcwegtyndaflidrlnwvsagvylnsnqtaenp
vfavfkdneilyqvplaeddtnaqktitdcfllenviwcislveiydtgdsvirpklfav
kipaqcses