PDB entry 6pcp

View 6pcp on RCSB PDB site
Description: mechanism for regulation of dna binding of bordetella bronchiseptica bpsr by 6-hydroxynicotinic acid
Deposited on 2019-06-17, released 2019-11-06
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MarR family Transcriptional regulator
    Species: Bordetella pertussis [TaxId:520]
    Gene: marR_2, ERS014547_01166
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: MarR family Transcriptional regulator
    Species: Bordetella pertussis [TaxId:520]
    Gene: marR_2, ERS014547_01166
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: MarR family Transcriptional regulator
    Species: Bordetella pertussis [TaxId:520]
    Gene: marR_2, ERS014547_01166
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: MarR family Transcriptional regulator
    Species: Bordetella pertussis [TaxId:520]
    Gene: marR_2, ERS014547_01166
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: MarR family Transcriptional regulator
    Species: Bordetella pertussis [TaxId:520]
    Gene: marR_2, ERS014547_01166
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: MarR family Transcriptional regulator
    Species: Bordetella pertussis [TaxId:520]
    Gene: marR_2, ERS014547_01166
    Database cross-references and differences (RAF-indexed):
  • Heterogens: OA7, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6pcpA (A:)
mpasqdkldvppgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqg
acslvdvvkataidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvp
faeqitqstfgglnpaervaivyllrkmsdaddlvgrqsds

    Sequence, based on observed residues (ATOM records):
    >6pcpA (A:)
pgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqgacslvdvvkat
aidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvpfaeqitqstfg
glnpaervaivyllrkmsda

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6pcpB (B:)
mpasqdkldvppgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqg
acslvdvvkataidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvp
faeqitqstfgglnpaervaivyllrkmsdaddlvgrqsds

    Sequence, based on observed residues (ATOM records):
    >6pcpB (B:)
pgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqgacslvdvvkat
aidqatvrgvierlkarkllavshdrrkvlvtltpdgralveemvpfaeqitqstfggln
paervaivyllrkms

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6pcpC (C:)
mpasqdkldvppgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqg
acslvdvvkataidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvp
faeqitqstfgglnpaervaivyllrkmsdaddlvgrqsds

    Sequence, based on observed residues (ATOM records):
    >6pcpC (C:)
gpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqgacslvdvvkata
idqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvpfaeqitqstfgg
lnpaervaivyllrkmsdad

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6pcpD (D:)
mpasqdkldvppgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqg
acslvdvvkataidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvp
faeqitqstfgglnpaervaivyllrkmsdaddlvgrqsds

    Sequence, based on observed residues (ATOM records):
    >6pcpD (D:)
gpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqgacslvdvvkata
idqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvpfaeqitqstfgg
lnpaervaivyllrkmsda

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6pcpE (E:)
mpasqdkldvppgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqg
acslvdvvkataidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvp
faeqitqstfgglnpaervaivyllrkmsdaddlvgrqsds

    Sequence, based on observed residues (ATOM records):
    >6pcpE (E:)
gpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqgacslvdvvkata
idqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvpfaeqitqstfgg
lnpaervaivyllrkmsdad

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6pcpF (F:)
mpasqdkldvppgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqg
acslvdvvkataidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvp
faeqitqstfgglnpaervaivyllrkmsdaddlvgrqsds

    Sequence, based on observed residues (ATOM records):
    >6pcpF (F:)
pgpyhfseqvghllrrayqrhvaifqqtipdskltaaqfvvlcalrdqgacslvdvvkat
aidqatvrgvierlkarkllavshdpadrrkvlvtltpdgralveemvpfaeqitqstfg
glnpaervaivyllrkmsda