PDB entry 6pac

View 6pac on RCSB PDB site
Description: E. coli L-asparaginase II in complex with L-Asp at pH 5.6
Class: hydrolase
Keywords: inactive mutant, hydrolysis of L-asparagine, HYDROLASE
Deposited on 2019-06-11, released 2019-09-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-asparaginase 2
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ansB, b2957, JW2924
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00805 (8-333)
      • expression tag (4-7)
    Domains in SCOPe 2.08: d6paca1, d6paca2
  • Chain 'B':
    Compound: L-asparaginase 2
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ansB, b2957, JW2924
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00805 (8-333)
      • expression tag (4-7)
    Domains in SCOPe 2.08: d6pacb1, d6pacb2
  • Chain 'C':
    Compound: L-asparaginase 2
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ansB, b2957, JW2924
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00805 (8-333)
      • expression tag (6-7)
    Domains in SCOPe 2.08: d6pacc1, d6pacc2
  • Chain 'D':
    Compound: L-asparaginase 2
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ansB, b2957, JW2924
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00805 (8-333)
      • expression tag (7)
    Domains in SCOPe 2.08: d6pacd1, d6pacd2
  • Heterogens: ASP, IMD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6pacA (A:)
mdhhhhhhlpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeq
vvnigsqdmndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmv
gamrpstsmsadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfk
svnygplgyihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalv
dagydgivsagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfv
asgtlnpqkarvllqlaltqtkdpqqiqqifnqy

    Sequence, based on observed residues (ATOM records): (download) 
    >6pacA (A:)
hhhhlpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeqvvni
gsqdmndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmvgamr
pstsmsadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfksvny
gplgyihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagy
dgivsagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgt
lnpqkarvllqlaltqtkdpqqiqqifnqy

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6pacB (B:)
mdhhhhhhlpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeq
vvnigsqdmndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmv
gamrpstsmsadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfk
svnygplgyihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalv
dagydgivsagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfv
asgtlnpqkarvllqlaltqtkdpqqiqqifnqy

    Sequence, based on observed residues (ATOM records): (download) 
    >6pacB (B:)
hhhhlpnitilatggtiaggkvgvenlvnavpqlkdianvkgeqvvnigsqdmndnvwlt
lakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmvgamrpstsmsadgpfn
lynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfksvnygplgyihngkid
yqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagydgivsagvgngn
lyksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgtlnpqkarvllql
altqtkdpqqiqqifnqy

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6pacC (C:)
mdhhhhhhlpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeq
vvnigsqdmndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmv
gamrpstsmsadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfk
svnygplgyihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalv
dagydgivsagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfv
asgtlnpqkarvllqlaltqtkdpqqiqqifnqy

    Sequence, based on observed residues (ATOM records): (download) 
    >6pacC (C:)
hhlpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeqvvnigs
qdmndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmvgamrps
tsmsadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfksvnygp
lgyihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagydg
ivsagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgtln
pqkarvllqlaltqtkdpqqiqqifnqy

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6pacD (D:)
mdhhhhhhlpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeq
vvnigsqdmndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmv
gamrpstsmsadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfk
svnygplgyihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalv
dagydgivsagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfv
asgtlnpqkarvllqlaltqtkdpqqiqqifnqy

    Sequence, based on observed residues (ATOM records): (download) 
    >6pacD (D:)
hlpnitilatggtiagvgkvgvenlvnavpqlkdianvkgeqvvnigsqdmndnvwltla
kkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmvgamrpstsmsadgpfnly
navvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfksvnygplgyihngkidyq
rtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagydgivsagvgngnly
ksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgtlnpqkarvllqlal
tqtkdpqqiqqifnqy