PDB entry 6p20

View 6p20 on RCSB PDB site
Description: bacteriophage phikz gp163.1 paar repeat protein in complex with a t4 gp5 beta-helix fragment modified to mimic the phikz central spike gp164
Deposited on 2019-05-20, released 2020-05-27
The last revision was dated 2020-05-27, with a file datestamp of 2020-05-22.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Baseplate central spike complex protein gp5,PHIKZ164
    Species: Pseudomonas phage phiKZ [TaxId:169683]
    Gene: PHIKZ164
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16009 (4-79)
      • expression tag (2-3)
      • linker (80-83)
    • Uniprot Q8SCZ8 (Start-111)
  • Chain 'B':
    Compound: Baseplate central spike complex protein gp5,PHIKZ164
    Species: Pseudomonas phage phiKZ [TaxId:169683]
    Gene: PHIKZ164
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16009 (4-79)
      • expression tag (3)
      • linker (80-83)
    • Uniprot Q8SCZ8 (Start-111)
  • Chain 'C':
    Compound: Baseplate central spike complex protein gp5,PHIKZ164
    Species: Pseudomonas phage phiKZ [TaxId:169683]
    Gene: PHIKZ164
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16009 (4-79)
      • expression tag (3)
      • linker (80-83)
    • Uniprot Q8SCZ8 (Start-111)
  • Chain 'D':
    Compound: PAAR-repeat central spike tip protein
    Species: Pseudomonas phage phiKZ [TaxId:169683]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, STE, ELA, EDO, PLM, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6p20A (A:)
gsgsgdetktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkva
gtvdwdvggdwtekmasmsskssgthiqeaggtmthkaggnmlftaprydft

    Sequence, based on observed residues (ATOM records):
    >6p20A (A:)
gsgdetktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkvagt
vdwdvggdwtekmasmsskssgthiqeaggtmthkaggnmlftaprydft

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6p20B (B:)
gsgsgdetktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkva
gtvdwdvggdwtekmasmsskssgthiqeaggtmthkaggnmlftaprydft

    Sequence, based on observed residues (ATOM records):
    >6p20B (B:)
sgdetktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkvagtv
dwdvggdwtekmasmsskssgthiqeaggtmthkaggnmlftaprydft

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6p20C (C:)
gsgsgdetktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkva
gtvdwdvggdwtekmasmsskssgthiqeaggtmthkaggnmlftaprydft

    Sequence, based on observed residues (ATOM records):
    >6p20C (C:)
sgdetktvegngtilvkgnvtiivegnaditvkgdattlvegnqtntvngnlswkvagtv
dwdvggdwtekmasmsskssgthiqeaggtmthkaggnmlftaprydft

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6p20D (D:)
mpgiavcnmdsaggvilpgpnvkcfykgqpfavigcavaghgrtphdsarmiqgsvkmai
agipvclqgsmascghtatgrpnltcgs

    Sequence, based on observed residues (ATOM records):
    >6p20D (D:)
pgiavcnmdsaggvilpgpnvkcfykgqpfavigcavaghgrtphdsarmiqgsvkmaia
gipvclqgsmascghtatgrpnltcgs