PDB entry 6oyh

View 6oyh on RCSB PDB site
Description: Crystal structure of MraY bound to carbacaprazamycin
Class: membrane protein/transferase
Keywords: peptidoglycan biosynthesis, antibiotic target, integral membrane enzyme, translocase, MEMBRANE PROTEIN, MEMBRANE PROTEIN-TRANSFERASE complex
Deposited on 2019-05-14, released 2019-07-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phospho-N-acetylmuramoyl-pentapeptide-transferase
    Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
    Gene: mraY, aq_053
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Phospho-N-acetylmuramoyl-pentapeptide-transferase
    Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
    Gene: mraY, aq_053
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Phospho-N-acetylmuramoyl-pentapeptide-transferase
    Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
    Gene: mraY, aq_053
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Phospho-N-acetylmuramoyl-pentapeptide-transferase
    Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
    Gene: mraY, aq_053
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: MraYAA nanobody
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OYH
    Domains in SCOPe 2.08: d6oyhe1, d6oyhe2
  • Chain 'F':
    Compound: MraYAA nanobody
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OYH
    Domains in SCOPe 2.08: d6oyhf_
  • Chain 'G':
    Compound: MraYAA nanobody
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OYH
    Domains in SCOPe 2.08: d6oyhg_
  • Chain 'H':
    Compound: MraYAA nanobody
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6OYH
    Domains in SCOPe 2.08: d6oyhh1, d6oyhh2
  • Heterogens: NK4, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6oyhE (E:)
mvpdvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgnt
ayadavkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywg
qgtqvtvsslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6oyhE (E:)
qlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgntayada
vkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywgqgtqv
tvss

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6oyhF (F:)
mvpdvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgnt
ayadavkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywg
qgtqvtvsslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6oyhF (F:)
dvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgntaya
davkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywgqgt
qvtvs

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6oyhG (G:)
mvpdvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgnt
ayadavkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywg
qgtqvtvsslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6oyhG (G:)
dvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgntaya
davkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywgqgt
qvtvs

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6oyhH (H:)
mvpdvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgnt
ayadavkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywg
qgtqvtvsslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6oyhH (H:)
dvqlqesggglvqtggsltlscatsgrsfslyamawfrqapgkerefvagvsrrgntaya
davkgrftisrdnaantvylqmtslkpedtavyfcaafrvavttytsqqaneynywgqgt
qvtvss