PDB entry 6ov0

View 6ov0 on RCSB PDB site
Description: crystal structure of csm6 in complex with a4>p by soaking a4>p into csm6
Deposited on 2019-05-06, released 2019-07-31
The last revision was dated 2019-09-18, with a file datestamp of 2019-09-13.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein
    Species: Thermococcus onnurineus (strain NA1) [TaxId:523850]
    Gene: TON_0898
    Database cross-references and differences (RAF-indexed):
    • Uniprot B6YWC3 (2-433)
      • expression tag (434)
  • Chain 'B':
    Compound: Uncharacterized protein
    Species: Thermococcus onnurineus (strain NA1) [TaxId:523850]
    Gene: TON_0898
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Uncharacterized protein
    Species: Thermococcus onnurineus (strain NA1) [TaxId:523850]
    Gene: TON_0898
    Database cross-references and differences (RAF-indexed):
    • Uniprot B6YWC3 (2-433)
      • expression tag (434)
  • Chain 'D':
    Compound: Uncharacterized protein
    Species: Thermococcus onnurineus (strain NA1) [TaxId:523850]
    Gene: TON_0898
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: RNA (5'-r(*ap*ap*ap*(a23))-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'F':
    Compound: RNA (5'-r(*ap*ap*ap*(a23))-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'G':
    Compound: RNA (5'-r(*ap*ap*ap*(a23))-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'H':
    Compound: RNA (5'-r(*ap*ap*ap*(a23))-3')
    Species: synthetic construct, synthetic [TaxId:32630]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ov0A (A:)
mgmkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfss
vetlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseii
ptkgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelni
ntiettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigs
llfglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkll
fqaritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdi
plrdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvgl
kkvedivsralkeshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ov0A (A:)
mkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfssve
tlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseiipt
kgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelnint
iettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigsll
fglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkllfq
aritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdipl
rdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvglkk
vedivsralkesh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ov0B (B:)
mgmkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfss
vetlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseii
ptkgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelni
ntiettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigs
llfglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkll
fqaritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdi
plrdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvgl
kkvedivsralkeshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ov0B (B:)
mkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfssve
tlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseiipt
kgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelnint
iettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigsll
fglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkllfq
aritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdipl
rdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvglkk
vedivsralkes

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ov0C (C:)
mgmkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfss
vetlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseii
ptkgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelni
ntiettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigs
llfglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkll
fqaritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdi
plrdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvgl
kkvedivsralkeshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ov0C (C:)
mkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfssve
tlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseiipt
kgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelnint
iettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigsll
fglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkllfq
aritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdipl
rdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvglkk
vedivsralkesh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ov0D (D:)
mgmkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfss
vetlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseii
ptkgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelni
ntiettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigs
llfglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkll
fqaritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdi
plrdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvgl
kkvedivsralkeshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ov0D (D:)
mkllvvswgdferwketkyrfggetsvgpstlpilqkvikpdwtvivlsdtigkdfssve
tlredvrnrvmdfldrigagrevdviiapgigefthgsfrgsamdayyyvlhalseiipt
kgdlevhfdsthglnyvtlltyralkdllgiaavmntvtfyaynsdpfvpkitkelnint
iettmvkptplseplpgfdeylcpysmeraefvrlkgslntlknlrkekkkleawigsll
fglpllfleefpdigrlesyieelaetwggaiavnaeekavtrrlafgsgfgtlvkllfq
aritrgllveepysieklysvsdrlfrgstlqrvrvelgkiedkaikyarkgafprdipl
rdflgfdaanrevsprnvlahagleanvvevsmeawepkrpeeeagrhthlkytpvglkk
vedivsralkes

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.