PDB entry 6ou9

View 6ou9 on RCSB PDB site
Description: asymmetric focused reconstruction of human norovirus gi.7 houston strain vlp asymmetric unit in t=3 symmetry
Deposited on 2019-05-04, released 2019-06-26
The last revision was dated 2019-11-20, with a file datestamp of 2019-11-15.
Experiment type: EM
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major capsid protein
    Species: Norovirus Hu/GI.7/TCH-060/USA/2003 [TaxId:1097017]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Major capsid protein
    Species: Norovirus Hu/GI.7/TCH-060/USA/2003 [TaxId:1097017]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Major capsid protein
    Species: Norovirus Hu/GI.7/TCH-060/USA/2003 [TaxId:1097017]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ou9A (A:)
    mmmaskdapsnmdgtsgagqlvpevnaaeplplepvvgaataaatagqvnlidpwimnnf
    vqapegeftispnntpgdilfdlhlgphlnpflqhlsqmyngwvgnmrvrvmlagnafta
    gkiiiccvppgfasqnisigqatmfphviadvrvlepieiplddvrnvlfhtnenrptmr
    llcmlytplraggassgtdpfviagrvltcpspdfnflflvppsveqktrqltvpnipln
    nlansrvpaminkmtvstdqnqvvqfqngrctlegqllgttpvsasqvarirgkvfstas
    gkglnlteldgtpyhafespaplgfpdigacdwhvstfkvdqnlsgdpmsrldvkqnapf
    aphlgsieftsdqdptgdqlgtlawvspstsgarvdpwkipsygstvtesthlappifpp
    gfgeaivyfmsdfpivsgntaqvpctlpqefvshfveqqapvrgeaallhyvdpdthrnl
    gefklypdgfitcvpntgggpqnlptngvfvfsswvsryyqlkpvgtagparrlgvrrv
    

    Sequence, based on observed residues (ATOM records):
    >6ou9A (A:)
    lplepvvgaataaatagqvnlidpwimnnfvqapegeftispnntpgdilfdlhlgphln
    pflqhlsqmyngwvgnmrvrvmlagnaftagkiiiccvppgfasqnisigqatmfphvia
    dvrvlepieiplddvrnvlfhtnenrptmrllcmlytplrapfviagrvltcpspdfnfl
    flvppsveqktrqltvpniplnnlansrvpaminkmtvstdqnqvvqfqngrctlegqll
    gttpvsasqvarirgkvfstasgkglnlteldgtpyhafespaplgfpdigacdwhvstf
    kvdqnlsgdpmsrldvkqnapfaphlgsieftsdqdptgdqlgtlawvspstsgarvdpw
    kipsygshlappifppgfgeaivyfmsdfpivsgntaqvpctlpqefvshfveqqapvrg
    eaallhyvdpdthrnlgefklypdgfitcvpntgggpqnlptngvfvfsswvsryyqlkp
    vgt
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ou9B (B:)
    mmmaskdapsnmdgtsgagqlvpevnaaeplplepvvgaataaatagqvnlidpwimnnf
    vqapegeftispnntpgdilfdlhlgphlnpflqhlsqmyngwvgnmrvrvmlagnafta
    gkiiiccvppgfasqnisigqatmfphviadvrvlepieiplddvrnvlfhtnenrptmr
    llcmlytplraggassgtdpfviagrvltcpspdfnflflvppsveqktrqltvpnipln
    nlansrvpaminkmtvstdqnqvvqfqngrctlegqllgttpvsasqvarirgkvfstas
    gkglnlteldgtpyhafespaplgfpdigacdwhvstfkvdqnlsgdpmsrldvkqnapf
    aphlgsieftsdqdptgdqlgtlawvspstsgarvdpwkipsygstvtesthlappifpp
    gfgeaivyfmsdfpivsgntaqvpctlpqefvshfveqqapvrgeaallhyvdpdthrnl
    gefklypdgfitcvpntgggpqnlptngvfvfsswvsryyqlkpvgtagparrlgvrrv
    

    Sequence, based on observed residues (ATOM records):
    >6ou9B (B:)
    dgtsgagqlvpevnaaeplplepvvgaataaatagqvnlidpwimnnfvqapegeftisp
    nntpgdilfdlhlgphlnpflqhlsqmyngwvgnmrvrvmlagnaftagkiiiccvppgf
    asqnisigqatmfphviadvrvlepieiplddvrnvlfhtnenrptmrllcmlytplrap
    fviagrvltcpspdfnflflvppsveqktrqltvpniplnnlansrvpaminkmtvstdq
    nqvvqfqngrctlegqllgttpvsasqvarirgkvfstasgkglnlteldgtpyhafesp
    aplgfpdigacdwhvstfkvdqnlsgdpmsrldvkqnapfaphlgsieftsdqdptgdql
    gtlawvspstsgarvdpwkipsygstvtesthlappifppgfgeaivyfmsdfpivsgnt
    aqvpctlpqefvshfveqqapvrgeaallhyvdpdthrnlgefklypdgfitcvpntggg
    pqnlptngvfvfsswvsryyqlkpvgt
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ou9C (C:)
    mmmaskdapsnmdgtsgagqlvpevnaaeplplepvvgaataaatagqvnlidpwimnnf
    vqapegeftispnntpgdilfdlhlgphlnpflqhlsqmyngwvgnmrvrvmlagnafta
    gkiiiccvppgfasqnisigqatmfphviadvrvlepieiplddvrnvlfhtnenrptmr
    llcmlytplraggassgtdpfviagrvltcpspdfnflflvppsveqktrqltvpnipln
    nlansrvpaminkmtvstdqnqvvqfqngrctlegqllgttpvsasqvarirgkvfstas
    gkglnlteldgtpyhafespaplgfpdigacdwhvstfkvdqnlsgdpmsrldvkqnapf
    aphlgsieftsdqdptgdqlgtlawvspstsgarvdpwkipsygstvtesthlappifpp
    gfgeaivyfmsdfpivsgntaqvpctlpqefvshfveqqapvrgeaallhyvdpdthrnl
    gefklypdgfitcvpntgggpqnlptngvfvfsswvsryyqlkpvgtagparrlgvrrv
    

    Sequence, based on observed residues (ATOM records):
    >6ou9C (C:)
    lplepvvgaataaatagqvnlidpwimnnfvqapegeftispnntpgdilfdlhlgphln
    pflqhlsqmyngwvgnmrvrvmlagnaftagkiiiccvppgfasqnisigqatmfphvia
    dvrvlepieiplddvrnvlfhtnenrptmrllcmlytplragpfviagrvltcpspdfnf
    lflvppsveqktrqltvpniplnnlansrvpaminkmtvstdqnqvvqfqngrctlegql
    lgttpvsasqvarirgkvfstasgkglnlteldgtpyhafespaplgfpdigacdwhvst
    fkvdqnlsgdpmsrldvkqnapfaphlgsieftsdqdptgdqlgtlawvspstsgarvdp
    wkipsygthlappifppgfgeaivyfmsdfpivsgntaqvpctlpqefvshfveqqapvr
    geaallhyvdpdthrnlgefklypdgfitcvpntgggpqnlptngvfvfsswvsryyqlk
    pvg