PDB entry 6or9

View 6or9 on RCSB PDB site
Description: Structure of L-lactate dehydrogenase from Trichoplusia ni
Class: oxidoreductase
Keywords: SSGCID, L-lactate dehydrogenase, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, OXIDOREDUCTASE
Deposited on 2019-04-29, released 2019-07-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: l-lactate dehydrogenase
    Species: Trichoplusia ni [TaxId:7111]
    Gene: XP_026745590
    Database cross-references and differences (RAF-indexed):
    • PDB 6OR9 (Start-363)
    Domains in SCOPe 2.08: d6or9a1, d6or9a2
  • Chain 'B':
    Compound: l-lactate dehydrogenase
    Species: Trichoplusia ni [TaxId:7111]
    Gene: XP_026745590
    Database cross-references and differences (RAF-indexed):
    • PDB 6OR9 (Start-363)
    Domains in SCOPe 2.08: d6or9b1, d6or9b2
  • Chain 'C':
    Compound: l-lactate dehydrogenase
    Species: Trichoplusia ni [TaxId:7111]
    Gene: XP_026745590
    Database cross-references and differences (RAF-indexed):
    • PDB 6OR9 (Start-363)
    Domains in SCOPe 2.08: d6or9c1, d6or9c2
  • Chain 'D':
    Compound: l-lactate dehydrogenase
    Species: Trichoplusia ni [TaxId:7111]
    Gene: XP_026745590
    Database cross-references and differences (RAF-indexed):
    • PDB 6OR9 (Start-363)
    Domains in SCOPe 2.08: d6or9d1, d6or9d2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6or9A (A:)
mrpyvclrlfsrnatrfaynlslplpplgvigkmatieklfqpvqeklddtgnkvtvvgv
gqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqastdysisag
skicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliiasnpvdiltyvsw
klsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvpvwsgvniag
vrlsdlnqkigsdsdpenwkethtmvvksayeviklkgytswaiglslsqlarailsnan
svhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakvqa
gikf

    Sequence, based on observed residues (ATOM records): (download) 
    >6or9A (A:)
gnkvtvvgvgqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqa
stdysisagskicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliiasnp
vdiltyvswklsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvp
vwsgvniagvrlsdlnqkinwkethtmvvksayeviklkgytswaiglslsqlarailsn
ansvhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakv
qagikf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6or9B (B:)
mrpyvclrlfsrnatrfaynlslplpplgvigkmatieklfqpvqeklddtgnkvtvvgv
gqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqastdysisag
skicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliiasnpvdiltyvsw
klsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvpvwsgvniag
vrlsdlnqkigsdsdpenwkethtmvvksayeviklkgytswaiglslsqlarailsnan
svhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakvqa
gikf

    Sequence, based on observed residues (ATOM records): (download) 
    >6or9B (B:)
dtgnkvtvvgvgqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvki
qastdysisagskicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliias
npvdiltyvswklsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdss
vpvwsgvniagvrlsdlnqkinwkethtmvvksayeviklkgytswaiglslsqlarail
snansvhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlma
kvqagikf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6or9C (C:)
mrpyvclrlfsrnatrfaynlslplpplgvigkmatieklfqpvqeklddtgnkvtvvgv
gqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqastdysisag
skicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliiasnpvdiltyvsw
klsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvpvwsgvniag
vrlsdlnqkigsdsdpenwkethtmvvksayeviklkgytswaiglslsqlarailsnan
svhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakvqa
gikf

    Sequence, based on observed residues (ATOM records): (download) 
    >6or9C (C:)
gnkvtvvgvgqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqa
stdysisagskicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliiasnp
vdiltyvswklsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvp
vwsgvniagvrlsdlnqknwkethtmvvksayeviklkgytswaiglslsqlarailsna
nsvhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakvq
agikf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6or9D (D:)
mrpyvclrlfsrnatrfaynlslplpplgvigkmatieklfqpvqeklddtgnkvtvvgv
gqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqastdysisag
skicvvtagvrqregesrldlvqrntdvlkiiipqlvkhspdtiliiasnpvdiltyvsw
klsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvpvwsgvniag
vrlsdlnqkigsdsdpenwkethtmvvksayeviklkgytswaiglslsqlarailsnan
svhavstylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakvqa
gikf

    Sequence, based on observed residues (ATOM records): (download) 
    >6or9D (D:)
gnkvtvvgvgqvgmaavfsmitqgvtnniamvdvmadklkgelmdlqhgsafmrnvkiqa
stdysisagskicvvtagvrsrldlvqrntdvlkiiipqlvkhspdtiliiasnpvdilt
yvswklsglpkhrvigsgtnldsarfryllseklgiattschgyiigehgdssvpvwsgv
niagvrlsdlnqnwkethtmvvksayeviklkgytswaiglslsqlarailsnansvhav
stylkgehdindevflslpcvlgrsgvcdvirqpltqtersqlhqsadlmakvqagikf