PDB entry 6oq1

View 6oq1 on RCSB PDB site
Description: Crystal Structure of Branched K11/K48-Linked Tri-Ubiquitin
Class: signaling protein
Keywords: signaling protein
Deposited on 2019-04-25, released 2019-10-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (10)
      • engineered mutation (47)
      • engineered mutation (62)
    Domains in SCOPe 2.07: d6oq1a_
  • Chain 'B':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (10)
      • engineered mutation (47)
      • engineered mutation (62)
    Domains in SCOPe 2.07: d6oq1b_
  • Chain 'C':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (47)
    Domains in SCOPe 2.07: d6oq1c_
  • Chain 'D':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (47)
    Domains in SCOPe 2.07: d6oq1d_
  • Chain 'E':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6oq1e_
  • Chain 'F':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6oq1f_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6oq1A (A:)
    mqifvktltgrtitlevepsdtienvkakiqdkegippdqqrlifagcqledgrtlsdyn
    iqrestlhlvlrlrgg
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6oq1B (B:)
    mqifvktltgrtitlevepsdtienvkakiqdkegippdqqrlifagcqledgrtlsdyn
    iqrestlhlvlrlrgg
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6oq1C (C:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6oq1D (D:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6oq1E (E:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrggd
    

    Sequence, based on observed residues (ATOM records): (download)
    >6oq1E (E:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvl
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6oq1F (F:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrggd
    

    Sequence, based on observed residues (ATOM records): (download)
    >6oq1F (F:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvl