PDB entry 6ooi

View 6ooi on RCSB PDB site
Description: Crystal structure of triosephosphate isomerase from Schistosoma mansoni in complex with 2PG
Class: isomerase
Keywords: isomerase
Deposited on 2019-04-23, released 2020-01-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-22, with a file datestamp of 2020-01-17.
Experiment type: XRAY
Resolution: 2.14 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooia_
  • Chain 'B':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooib_
  • Chain 'C':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed):
    • Uniprot P48501 (3-End)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d6ooic1, d6ooic2
  • Chain 'D':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooid_
  • Chain 'E':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooie_
  • Chain 'F':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooif_
  • Chain 'G':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooig_
  • Chain 'H':
    Compound: triosephosphate isomerase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: tpi
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ooih_
  • Heterogens: PGA, CL, NA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ooiA (A:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiA (A:)
srkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeihva
aqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaegls
viacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvatpq
qaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslkpe
fteickarqr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ooiB (B:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiB (B:)
srkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeihva
aqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaegls
viacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvatpq
qaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslkpe
fteickarq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6ooiC (C:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiC (C:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6ooiD (D:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiD (D:)
sgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeih
vaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaeg
lsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvat
pqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslk
pefteickarq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6ooiE (E:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiE (E:)
srkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeihva
aqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaegls
viacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvatpq
qaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslkpe
fteickarq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6ooiF (F:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiF (F:)
gsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeihv
aaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaegl
sviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvatp
qqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslkp
efteickarq

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6ooiG (G:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiG (G:)
srkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeihva
aqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaegls
viacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvatpq
qaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslkpe
fteickarq

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6ooiH (H:)
gphmsgsrkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslk
keihvaaqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqha
laeglsviacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtg
kvatpqqaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvgg
aslkpefteickarqr

    Sequence, based on observed residues (ATOM records): (download) 
    >6ooiH (H:)
srkffvggnwkmngsrddndkllkllseahfddntevliappsvflheirkslkkeihva
aqncykvskgaftgeispamirdigcdwvilghserrnifgesdeliaekvqhalaegls
viacigetlseresnkteevcvrqlkaiankiksadewkrvvvayepvwaigtgkvatpq
qaqevhnflrkwfktnapngvdekiriiyggsvtaanckelaqqhdvdgflvggaslkpe
fteickarqr