PDB entry 6onf

View 6onf on RCSB PDB site
Description: crystal structure of hiv-1 lm/ht clade a/e crf01 gp120 core in complex with (s)-mcg-iii-188-a02.
Deposited on 2019-04-22, released 2019-10-23
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: clade A/E 93TH057 HIV-1 gp120 core
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: HIV-1 ENV
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0M3KKW9 (2-354)
      • expression tag (1)
      • engineered mutation (19)
      • engineered mutation (63)
      • engineered mutation (66)
      • engineered mutation (243)
      • engineered mutation (336-338)
  • Heterogens: NAG, MW4, EPE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6onfA (A:)
vpvwkdadttlfcasdakayetevhnvwathacvptdpnpqeihlenvtenfnmwknnmv
eqmhediislwdqslqpcvkltggsvikqacpkisfdpipihyctpagyvilkcndknfn
gtgpcknvssvqcthgikpvvstqlllngslaeeeiiirsenltnnaktiivhlnksvei
nctrpsnggsgsggdirkayceingtkwnkvlkqvteklkehfnnktiifqppsggdlei
tmhtfncrgeffycnttqlfnntcignetmkgcngtitlpckikqiinmwqgtgqamyap
pidgkincvsnitgilltrdgganntsnetfrpgggdmrdnwrselykykvvqie

    Sequence, based on observed residues (ATOM records):
    >6onfA (A:)
pvwkdadttlfcasdakayetevhnvwathacvptdpnpqeihlenvtenfnmwknnmve
qmhediislwdqslqpcvkltggsvikqacpkisfdpipihyctpagyvilkcndknfng
tgpcknvssvqcthgikpvvstqlllngslaeeeiiirsenltnnaktiivhlnksvein
ctrpsdirkayceingtkwnkvlkqvteklkehfnnktiifqppsggdleitmhtfncrg
effycnttqlfnntcigcngtitlpckikqiinmwqgtgqamyappidgkincvsnitgi
lltrdgganntsnetfrpgggdmrdnwrselykykvvqie