PDB entry 6onb
View 6onb on RCSB PDB site
Description: crystal structure of the zig-8-rig-5 ig1-ig1 heterodimer, monoclinic form
Deposited on
2019-04-20, released
2019-05-15
The last revision was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Zwei Ig domain protein zig-8
Species: Caenorhabditis elegans [TaxId:6239]
Gene: zig-8, Y39E4B.8
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: NeuRonal IgCAM-5
Species: Caenorhabditis elegans [TaxId:6239]
Gene: rig-5, C36F7.4, CELE_C36F7.4
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Zwei Ig domain protein zig-8
Species: Caenorhabditis elegans [TaxId:6239]
Gene: zig-8, Y39E4B.8
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: NeuRonal IgCAM-5
Species: Caenorhabditis elegans [TaxId:6239]
Gene: rig-5, C36F7.4, CELE_C36F7.4
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, NAG, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence, based on SEQRES records:
>6onbA (A:)
adpaseevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgall
tagnrtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvleph
hhhhh
Sequence, based on observed residues (ATOM records):
>6onbA (A:)
aseevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgalltag
nrtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvlep
- Chain 'B':
Sequence, based on SEQRES records:
>6onbB (B:)
gsgapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrr
nkyelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkvphhhhhh
Sequence, based on observed residues (ATOM records):
>6onbB (B:)
gapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrrnk
yelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkvp
- Chain 'C':
Sequence, based on SEQRES records:
>6onbC (C:)
adpaseevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgall
tagnrtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvleph
hhhhh
Sequence, based on observed residues (ATOM records):
>6onbC (C:)
seevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgalltagn
rtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvle
- Chain 'D':
Sequence, based on SEQRES records:
>6onbD (D:)
gsgapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrr
nkyelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkvphhhhhh
Sequence, based on observed residues (ATOM records):
>6onbD (D:)
gapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrrnk
yelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkv