PDB entry 6onb

View 6onb on RCSB PDB site
Description: crystal structure of the zig-8-rig-5 ig1-ig1 heterodimer, monoclinic form
Deposited on 2019-04-20, released 2019-05-15
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Zwei Ig domain protein zig-8
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: zig-8, Y39E4B.8
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: NeuRonal IgCAM-5
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: rig-5, C36F7.4, CELE_C36F7.4
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Zwei Ig domain protein zig-8
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: zig-8, Y39E4B.8
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: NeuRonal IgCAM-5
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: rig-5, C36F7.4, CELE_C36F7.4
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, NAG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6onbA (A:)
    adpaseevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgall
    tagnrtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvleph
    hhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6onbA (A:)
    aseevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgalltag
    nrtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvlep
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6onbB (B:)
    gsgapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrr
    nkyelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkvphhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6onbB (B:)
    gapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrrnk
    yelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkvp
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6onbC (C:)
    adpaseevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgall
    tagnrtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvleph
    hhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6onbC (C:)
    seevmaclrqersrvenpsqtivnvvaenpaylhcsvppdaeheiawtrvsdgalltagn
    rtftrdprwqvskksaniwvlnlrraeqqdsgcylceindkhntvyavylkvle
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6onbD (D:)
    gsgapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrr
    nkyelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkvphhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6onbD (D:)
    gapptiqqpsmssavallgqdvdftcivndlgshmvafvkadspprllsfdekvfrrrnk
    yelkprigdlhnewvltiknvqesdrgnyscqintepitlstgeldvkv