PDB entry 6omt

View 6omt on RCSB PDB site
Description: HIV-1 capsid hexamer R18D mutant
Class: viral protein
Keywords: HIV-1, capsid, CA, VIRAL PROTEIN
Deposited on 2019-04-19, released 2019-08-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-11-27, with a file datestamp of 2019-11-22.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot B6DRA0 (1-End)
      • engineered mutation (14)
      • engineered mutation (18)
      • engineered mutation (45)
      • engineered mutation (184-185)
    Domains in SCOPe 2.08: d6omta1, d6omta2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6omtA (A:)
mpivqnlqgqmvhqcispdtlnawvkvveekafspevipmfsalscgatpqdlntmlntv
gghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmt
hnppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasq
evknaatetllvqnanpdcktilkalgpgatleemmtacqgvggpghkarvl

    Sequence, based on observed residues (ATOM records): (download) 
    >6omtA (A:)
pivqnlqgqmvhqcispdtlnawvkvveekafspevipmfsalscgatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhiapgqmreprgsdiagttstlqeqigwmthnpp
ipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqevkn
aatetllvqnanpdcktilkalgpgatleemmtacq