PDB entry 6olm

View 6olm on RCSB PDB site
Description: cryoem structure of pilt4 from geobacter metallireducens with added atp: c6cccccc conformation
Deposited on 2019-04-16, released 2019-11-20
The last revision was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: EM
Resolution: 4.4 Å
R-factor: N/A
AEROSPACI score: -0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ATP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6olmA (A:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olmA (A:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6olmB (B:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olmB (B:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6olmC (C:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olmC (C:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6olmD (D:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olmD (D:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6olmE (E:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olmE (E:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6olmF (F:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olmF (F:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt