PDB entry 6olk

View 6olk on RCSB PDB site
Description: cryoem structure of pilt4 from geobacter metallireducens without adding nucleotide: c3ocococ conformation
Deposited on 2019-04-16, released 2019-11-20
The last revision was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: EM
Resolution: 4 Å
R-factor: N/A
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6olkA (A:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olkA (A:)
nmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqkh
kfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelaek
prglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevgad
tksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinriv
dvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkihq
iysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqml

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6olkB (B:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olkB (B:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqm

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6olkC (C:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olkC (C:)
nmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqkh
kfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelaek
prglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevgad
tksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinriv
dvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkihq
iysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqml

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6olkD (D:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olkD (D:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqm

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6olkE (E:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olkE (E:)
nmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqkh
kfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelaek
prglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevgad
tksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinriv
dvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkihq
iysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqml

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6olkF (F:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6olkF (F:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqm