PDB entry 6okv

View 6okv on RCSB PDB site
Description: pilt4 from geobacter metallireducens bound to amp-pnp: c2ccocco conformation
Deposited on 2019-04-15, released 2019-11-20
The last revision was dated 2020-01-08, with a file datestamp of 2020-01-03.
Experiment type: XRAY
Resolution: 4.01 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q39VU6 (20-End)
      • expression tag (15-19)
  • Chain 'E':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Twitching motility pilus retraction ATPase
    Species: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [TaxId:269799]
    Gene: pilT-4, Gmet_1394
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, ANP, ADP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6okvA (A:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6okvA (A:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlts

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6okvB (B:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6okvB (B:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqml

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6okvC (C:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6okvC (C:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6okvD (D:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6okvD (D:)
prgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysi
lteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppv
vrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvn
qrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsav
qtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnli
redkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlts

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6okvE (E:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6okvE (E:)
manmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqq
khkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrela
ekprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevg
adtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinr
ivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredki
hqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlts

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6okvF (F:)
mgsshhhhhhssglvprgshmanmhqlltelvnrggsdlhlttnsppqiridgkllpldm
pplnavdtkqlcysilteqqkhkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvi
pykilsfeelglppvvrelaekprglvlvtgptgsgksttlaaiidkintdrhehivtve
dpieylhphkscvvnqrevgadtksfknalkyilrqdpdvvlvgelrdletieaaltlae
tghlcfatlhtnsavqtinrivdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvl
aievmvpnpairnliredkihqiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgr
spdpdelkqmltsgvrpqaprppmr

    Sequence, based on observed residues (ATOM records):
    >6okvF (F:)
anmhqlltelvnrggsdlhlttnsppqiridgkllpldmpplnavdtkqlcysilteqqk
hkfeenneldlsfgikglsrfrgnvfvqrgavagvfrvipykilsfeelglppvvrelae
kprglvlvtgptgsgksttlaaiidkintdrhehivtvedpieylhphkscvvnqrevga
dtksfknalkyilrqdpdvvlvgelrdletieaaltlaetghlcfatlhtnsavqtinri
vdvfpsyqqpqvraqlsfvlegvlsqtllpkasgtgrvlaievmvpnpairnliredkih
qiysqmqvgqekfgmmtmnqclygllqkrhitmdvgmgrspdpdelkqmlts